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Information on SUBCLASS 2.2.5
Subclass Accession number: 8921
Subclass: 2.2.5 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 4.8 +/- 7.4
Average RMSD (Å) : 0.633 +/- 0.242

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXXXX
(φψ)-conformation: aalpaa
Pattern: x[agmtv]xx[aet][ADGKS][dnrw]xxx[afl]
Conservation:0.555-0.213-1.5430.7461.0211.564-0.372-0.9440.186-1.4100.411
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ed8_A_3251ed8   A328338KQDHAANPCGQHHHHTT-HHHHaaaaalbaaaa
1ew2_A_3151ew2   A317327HGHHESRAYRAHHHHTT-HHHHaaaaavbaaaa
1fi4_A_2391fi4   A239249KAIVEKDFATFHHHHTT-HHHHaaaaalxaaaa
1g6a_A_1191g6a   A125135ATMTTSDNTAAHHHHH--HHHHaaaaavpaaaa
1gyt_A_2251gyt   A227237QMKELGMHSYLHHHHTT-HHHHaaaaavxaaaa
1l0l_K_81l0l   K3242LVWATDWRLILHHHHHT-HHHHaaaaalpaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ed8_A_3251ed8   A     ZNZINC ION D - 327
1ed8_A_3251ed8   A     MGMAGNESIUM ION D - 327
1ed8_A_3251ed8   A     PO4PHOSPHATE ION D - 327
1ed8_A_3251ed8   A     ZNZINC ION K - 328
1ed8_A_3251ed8   A     MGMAGNESIUM ION K - 328
1ed8_A_3251ed8   A     PO4PHOSPHATE ION K - 328
1ed8_A_3251ed8   A     ZNZINC ION H - 331
1ed8_A_3251ed8   A     PO4PHOSPHATE ION H - 331
1ew2_A_3151ew2   A     ZNZINC ION D - 316
1ew2_A_3151ew2   A     MGMAGNESIUM ION D - 316
1ew2_A_3151ew2   A     PO4PHOSPHATE ION D - 316
1ew2_A_3151ew2   A     ZNZINC ION H - 317
1ew2_A_3151ew2   A     MGMAGNESIUM ION H - 317
1ew2_A_3151ew2   A     PO4PHOSPHATE ION H - 317
1ew2_A_3151ew2   A     ZNZINC ION H - 320
1ew2_A_3151ew2   A     PO4PHOSPHATE ION H - 320
1fi4_A_2391fi4   A     MSESELENOMETHIONINE K - 239
1fi4_A_2391fi4   A     MSESELENOMETHIONINE A - 240
1fi4_A_2391fi4   A     MSESELENOMETHIONINE I - 241
1fi4_A_2391fi4   A     MSESELENOMETHIONINE V - 242
1fi4_A_2391fi4   A     MSESELENOMETHIONINE F - 246
1fi4_A_2391fi4   A     MSESELENOMETHIONINE A - 247
1fi4_A_2391fi4   A     MSESELENOMETHIONINE T - 248
1fi4_A_2391fi4   A     MSESELENOMETHIONINE F - 249
1fi4_A_2391fi4   A     MSESELENOMETHIONINE A - 250
1fi4_A_2391fi4   A     MSESELENOMETHIONINE K - 251
1fi4_A_2391fi4   A     MSESELENOMETHIONINE E - 252

Clusters included in this Subclass
CLUSTER: HH.2.123
CLUSTER: HH.3.133
CLUSTER: HH.3.198