Information on SUBCLASS 2.2.7 |
Subclass Accession number: 8923
Subclass: 2.2.7 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 5.9 +/- 8.0 Average RMSD (Å) : 0.525 +/- 0.050 Consensus geometry
|
Consensus Sequence: | XppDpX |
(φψ)-conformation: | aalpaa |
Pattern: | x | [AEG] | [GKN] | x | x | x | x | x | x | x | x | x | x | x | [AGN] | [AL] | x | [AENR] | [GKQR] | x | x | [AKT] | x | [AIK] | x | [AEKS] | x | [GSTV] | [HLV] | [EKRS] | [AILV] |
Conservation: | -0.759 | 0.744 | 1.635 | -0.652 | 0.201 | -0.759 | -0.865 | -0.972 | -1.291 | -0.012 | -0.545 | -0.865 | -0.759 | -0.545 | 0.930 | 1.373 | -0.759 | 0.094 | 0.627 | 2.421 | -0.759 | 0.911 | -1.931 | -0.479 | -0.012 | 0.734 | -0.545 | -0.439 | 0.635 | 1.267 | 1.373 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f1s_A_427 | 1f1s | A | 427 | 457 | GGNLVDMGRVKIIEGLLRKDNTIIEKTSHSL | HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH | eaaaaaaaaaaaaaaaaalbaaaaaaaaaaa |
1kae_A_397 | 1kae | A | 397 | 427 | KEGFSALASTIETLAAAERLTAHKNAVTLRV | HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH | aaaaaaaaaaaaaaaaaalbaaaaaaaaaaa |
2a0b_*_677 | 2a0b | - | 687 | 717 | FEKMMPGYVSVLESNLTAQDKKGIVEEGHKI | HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH | aaaaaaaaaaaaaaaaaalxaaaaaaaaaaa |
2e2a_A_3 | 2e2a | A | 16 | 46 | YAGDARSKLLEALKAAENGDFAKADSLVVEA | HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHH | aaaaaaaaaaaaaaaaaavxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kae_A_397 | 1kae | A | MSESELENOMETHIONINE | T - 406 |
1kae_A_397 | 1kae | A | MSESELENOMETHIONINE | L - 410 |
1kae_A_397 | 1kae | A | IMDIMIDAZOLE | E - 414 |
1kae_A_397 | 1kae | A | ZNZINC ION | L - 416 |
1kae_A_397 | 1kae | A | IMDIMIDAZOLE | L - 416 |
1kae_A_397 | 1kae | A | ZNZINC ION | H - 419 |
1kae_A_397 | 1kae | A | IMDIMIDAZOLE | H - 419 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2a0b_*_677 | 2a0b | * | PHBPHOSPHORYLATION SITE. | H - 715 |
Clusters included in this Subclass |
CLUSTER: HH.4.125 |