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Information on SUBCLASS 2.3.2
Subclass Accession number: 8936
Subclass: 2.3.2 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 10.1 +/- 11.1
Average RMSD (Å) : 0.760 +/- 0.237

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XphphX
(φψ)-conformation: aabpaa
Pattern: [acfilvw][degqs][HILMV][flmv][eknqsy][aeknq]x[AFGLWY]x[ADEKQS][acglmtv][DEHPQST][aiklv][aegq][CDEQST][ilmv]x
Conservation:-0.961-0.3461.9830.032-0.162-0.332-1.185-0.518-1.3991.077-1.0160.3630.8880.0940.4341.828-0.780
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bmq_B_3481bmq   B354370IEHMQEYACSCDVEEIFHHHHHHHTTTS-HHHHHaaaaaaaaaabxaaaaa
1dx4_A_3901dx4   A394410LEIMNNIFGKATQAEREHHHHHHHTTTS-HHHHHaaaaaaaaaaxpaaaaa
1f1j_A_2401f1j   A246262CSILEEHGKDLEIMQILHHHHHHHTTTS-HHHHHaaaaaaaaaabxaaaaa
1hbn_B_2511hbn   B253269FDLVKANGKEGTVGSVIHHHHHHHTTT--HHHHHaaaaaaaaaNxbaaaaa
1jgt_A_4241jgt   A424440WVLRAAMADALPAETVNHHHHHHHTTTS-HHHHHaaaaaaaaaabxaaaaa
1kg2_A_301kg2   A3349VWLSEVMLQQTQVATVIHHHHHHHHTSS-HHHHHaaaaaaaaaabxaaaaa
1kiy_A_601kiy   A7187VGMVVYSWAKVSKECMAHHHHHHHSTTS-HHHHHaaaaaaaaaaxxaaaaa
1nw9_B_3621nw9   B368384DDIFEQWAHSEDLQSLLHHHHHHHTTTS-HHHHHaaaaaaaaaabxaaaaa
1o0w_A_511o0w   A6682CEILYKKYPEAEVGDLAHHHHHHH-TTS-HHHHHaaaaaaaaaaxxaaaaa
1pyo_B_2381pyo   B244260AQVFSERACDMHVADMLHHHHHHHTTTS-HHHHHaaaaaaaaaNbxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bmq_B_3481bmq   B     MNO(3S)-N-METHANESULFONYL-3-({1-[N-(2-NAPHTOYL)-L-VALYL]-L-PROLYL}AMINO)-4-OXOBUTANAMIDE V - 348
1hbn_B_2511hbn   B     MGMAGNESIUM ION N - 259
1hbn_B_2511hbn   B     GOLGLYCEROL T - 264
1hbn_B_2511hbn   B     MGMAGNESIUM ION S - 267
1hbn_B_2511hbn   B     MGMAGNESIUM ION A - 270
1hbn_B_2511hbn   B     MGMAGNESIUM ION D - 271
1hbn_B_2511hbn   B     MGMAGNESIUM ION E - 274
1jgt_A_4241jgt   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER R - 427
1kg2_A_301kg2   A     GOLGLYCEROL P - 30
1kg2_A_301kg2   A     GOLGLYCEROL Y - 31
1kg2_A_301kg2   A     GOLGLYCEROL K - 32
1kg2_A_301kg2   A     GOLGLYCEROL R - 58
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL T - 69
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL I - 70
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL M - 73
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL W - 78
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL Y - 93
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL Y - 95
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL T - 96
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL L - 97
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL V - 98
1kiy_A_601kiy   A     EDO1,2-ETHANEDIOL L - 99

Clusters included in this Subclass
CLUSTER: HH.4.19