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Information on SUBCLASS 2.3.8
Subclass Accession number: 8942
Subclass: 2.3.8 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 19.2 +/- 39.7
Average RMSD (Å) : 0.550 +/- 0.311

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: pXhXXX
(φψ)-conformation: aabpaa
Pattern: xxxxxxxxxxxxx
Conservation:-0.751-1.5670.4720.045-1.1591.287-0.9551.8990.2680.880-0.140-0.5470.268
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f8r_A_1731f8r   A176188ILNKYDTYSTKEYHHHHTTSSBHHHHaaaaaaabxaaaa
1h3e_A_1371h3e   A140152VVRLTSLMTVAQMHHHHGGGS-HHHHaaaaaaabbaaaa
1h3f_A_1371h3f   A140152VVRLTSLMTVAQMHHHHHTTS-HHHHaaaaaaabbaaaa
1i1i_P_3541i1i   P354366QESLKEYFPIEVVHHHHGGG-BHHHHaaaaaaabxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f8r_A_1731f8r   A     NAGN-ACETYL-D-GLUCOSAMINE S - 174
1f8r_A_1731f8r   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 175
1f8r_A_1731f8r   A     FUCFUCOSE Y - 175

Clusters included in this Subclass
CLUSTER: HH.5.94