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Information on SUBCLASS 2.4.2
Subclass Accession number: 8951
Subclass: 2.4.2 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 7.5 +/- 12.4
Average RMSD (Å) : 0.843 +/- 0.230

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: pXhpXX
(φψ)-conformation: aapbaa
Pattern: x[aekq][adeqs][afl]x[AEQRST]x[FILTVY][ADET]xxxx[AFILY]
Conservation:-0.1860.595-0.226-0.359-0.7131.040-0.8761.1101.573-1.536-0.460-0.184-1.2561.478
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3w_A_3411a3w   A352365AVIAEQAIAYLPNYHHHHTTS--HHHHHaaaaaaabxaaaaa
1hnn_A_231hnn   A2336VASAYQRFEPRAYLHHHHHTTB-HHHHHaaaaaaapbaaaaa
1ire_A_1831ire   A183196EEELATLVTRESMIHHHHHTT--HHHHHaaaaaaaxbaaaaa
1p7t_A_5531p7t   A556569VQANIAQTEFNAEFHHHHHTTS-HHHHHaaaaaaaxxaaaaa
1pj3_A_4881pj3   A495508AKALTSQLTDEELAHHHHHTT--HHHHHaaaaaaaxbaaaaa
2ahj_A_1832ahj   A183196QEQLQEIVTKDCLIHHHHHTT--HHHHHaaaaaaabxaaaaa
2occ_I_402occ   I4760YADFYRNYDSMKDFHHHHTTS--HHHHHaaaaaaaxbaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 23
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 24
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 27
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 30
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 35
1hnn_A_231hnn   A     SKF1,2,3,4-TETRAHYDRO-ISOQUINOLINE-7-SULFONIC ACID AMIDE Y - 35
1hnn_A_231hnn   A     SKF1,2,3,4-TETRAHYDRO-ISOQUINOLINE-7-SULFONIC ACID AMIDE N - 38
1hnn_A_231hnn   A     SKF1,2,3,4-TETRAHYDRO-ISOQUINOLINE-7-SULFONIC ACID AMIDE N - 39
1hnn_A_231hnn   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 40
1hnn_A_231hnn   A     SKF1,2,3,4-TETRAHYDRO-ISOQUINOLINE-7-SULFONIC ACID AMIDE Y - 40
1p7t_A_5531p7t   A     PEGDI(HYDROXYETHYL)ETHER V - 553
1p7t_A_5531p7t   A     PEGDI(HYDROXYETHYL)ETHER Q - 554
1p7t_A_5531p7t   A     PEGDI(HYDROXYETHYL)ETHER S - 555
1p7t_A_5531p7t   A     PEGDI(HYDROXYETHYL)ETHER Q - 557
1pj3_A_4881pj3   A     MSESELENOMETHIONINE D - 488
1pj3_A_4881pj3   A     MSESELENOMETHIONINE S - 489
1pj3_A_4881pj3   A     MSESELENOMETHIONINE V - 490
1pj3_A_4881pj3   A     MSESELENOMETHIONINE L - 492

Clusters included in this Subclass
CLUSTER: HH.4.159
CLUSTER: HH.5.28