Information on SUBCLASS 3.4.5 |
Subclass Accession number: 8999
Subclass: 3.4.5 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 9.0 +/- 11.5 Average RMSD (Å) : 0.714 +/- 0.219 Consensus geometry
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Consensus Sequence: | XXXXpXp |
(φψ)-conformation: | aapapaa |
Pattern: | x | [AENST] | [dkny] | [IL] | x | x | x | [eknprt] | [DNST] | x | [DEKNQSY] | [aekqs] | x | [aenst] | x | [cfilm] | [afilv] |
Conservation: | -0.253 | 0.572 | -0.345 | 3.111 | -0.423 | -0.866 | -0.548 | -0.743 | 1.555 | -1.027 | 0.167 | 0.164 | -0.372 | -0.165 | -0.539 | -0.192 | -0.095 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ezf_A_270 | 1ezf | A | 274 | 290 | ITYLSRLRNQSVFNFCA | HHHHHT---HHHHHHHH | aaaaaaxaxaaaaaaaa |
1hn0_A_450 | 1hn0 | A | 454 | 470 | LALLLLEPDDQKRINLV | HHHHHT-SSHHHHHHHH | aaaaaapaxaaaaaaaa |
1kho_A_174 | 1kho | A | 176 | 192 | YSNILTNEDFNSWSKEF | HHHHHS-S-HHHHHHHH | aaaaaaxaxaaaaaaaa |
1mhy_G_11 | 1mhy | G | 17 | 33 | EAKIAKLTSVDQATKFI | HHHHHT--SHHHHHHHH | aaaaaaxabaaaaaaaa |
1mhy_G_88 | 1mhy | G | 96 | 112 | IAKIKAAKSKYEAEAIH | HHHHHT--SHHHHHHHH | aaaaaaxabaaaaaaaa |
1mty_G_10 | 1mty | G | 16 | 32 | VNKIAHVNTLEKAAEML | HHHHHT--SHHHHHHHH | aaaaaaxabaaaaaaaa |
1pme_*_249 | 1pme | - | 249 | 265 | QEDLNCIINLKARNYLL | HHHHHT---HHHHHHHH | aaaaaabaxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.5.30 |