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PDB code:

Information on SUBCLASS 3.5.2

Subclass Accession number: 9003 Subclass: 3.5.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 3 Average sequence ID (%) : 31.6 +/- 16.2 Average RMSD (Å) : 0.267 +/- 0.115 Consensus geometry d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bkj_A_54	1bkj	A	54	72	SEKRNELAQFAGNQAYVES	HHHHHHHHHHTTS-THHHH	aaaaaaaaaaavlxaaaaa
1f5v_A_54	1f5v	A	54	72	KALREELVTLTGGQKHVAQ	HHHHHHHHHHTTS-THHHH	aaaaaaaaaaavvxaaaaa
1nox_*_60	1nox	-	60	78	PATKRALREAAFGQAHVEE	HHHHHHHHHHTTT-THHHH	aaaaaaaaaaalvxaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bkj_A_54	1bkj	A	FMNFLAVIN MONONUCLEOTIDE	A - 64
1bkj_A_54	1bkj	A	FMNFLAVIN MONONUCLEOTIDE	Q - 67
1bkj_A_54	1bkj	A	PO4PHOSPHATE ION	Q - 67
1bkj_A_54	1bkj	A	FMNFLAVIN MONONUCLEOTIDE	Y - 69
1f5v_A_54	1f5v	A	FMNFLAVIN MONONUCLEOTIDE	T - 64
1f5v_A_54	1f5v	A	FMNFLAVIN MONONUCLEOTIDE	H - 69
1nox_*_60	1nox	*	FMNFLAVIN MONONUCLEOTIDE	Q - 73
1nox_*_60	1nox	*	FMNFLAVIN MONONUCLEOTIDE	H - 75

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1bkj_A_54	1bkj	A	ASAFMN COFACTOR BINDING SITE-CHAIN A.	Q - 67

Clusters included in this Subclass

CLUSTER: HH.4.180

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