ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.6.2

Subclass Accession number: 9005
Subclass: 3.6.2

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 55.3 +/- 16.7
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	TpTpDXK
(φψ)-conformation:	aabapaa

Pattern:	[P]	[AEQ]	[HK]	[A]	[R]	[ILV]	[L]	[ALM]	x	[LV]	[A]	[LM]	[T]	[KQR]	[T]	[KNQS]	[D]	[APS]	[KQ]	x	[IL]	[Q]	[ENQR]	[IMY]	[F]
Conservation:	2.169	-0.962	-0.410	0.397	0.988	-0.327	0.397	-1.063	-1.232	-0.418	0.397	-0.071	0.988	-0.417	0.988	-1.081	1.578	-1.037	-0.091	-1.195	-0.146	0.988	-0.970	-1.048	1.578

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1agx_*_304	1agx	-	304	328	PQKARLLMALALTKTNDAKEIQNMF	HHHHHHHHHHHTTT---HHHHHHHH	aaaaaaaaaaaaaabaxaaaaaaaa
1nns_A_299	1nns	A	299	323	PQKARVLLQLALTQTKDPQQIQQIF	HHHHHHHHHHHTTT---HHHHHHHH	aaaaaaaaaaaaaabaxaaaaaaaa
1o7j_A_300	1o7j	A	300	324	PAHARILLMLALTRTSDPKVIQEYF	HHHHHHHHHHHTTT---HHHHHHHH	aaaaaaaaaaaaaabaxaaaaaaaa
4pga_A_310	4pga	A	310	334	PEKARILAMVAMTKTQDSKELQRIF	HHHHHHHHHHHTTT---HHHHHHHH	aaaaaaaaaaaaaabaxaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass