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Information on SUBCLASS 3.7.1
Subclass Accession number: 9006
Subclass: 3.7.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 29.0 +/- 21.9
Average RMSD (Å) : 0.433 +/- 0.234

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXAXchX
(φψ)-conformation: aapabaa
Pattern: [RS][AS][ILV]xx[a][ADEP][DNS][LPY]x[AEKS][A][AIVY][AKR][AGKQR][FIV]x
Conservation:0.1750.8371.258-1.260-1.6410.427-0.2441.170-0.235-1.041-0.3472.119-0.5700.520-0.8320.425-0.761
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dbt_A_2151dbt   A215231RSITKAEDPVKAYKAVRHHHHTSS-HHHHHHHHHaaaaaxabaaaaaaaaa
1dvj_A_2031dvj   A203219RSIYLADNPAAAAAGIIHHHHTSSSHHHHHHHHHaaaaaxabaaaaaaaaa
1pii_*_2371pii   -237253SALMAHDDLHAAVRRVLHHHHT-S-HHHHHHHHHaaaaabaxaaaaaaaaa
1q6o_A_1921q6o   A192208RSIRDAASPVEAARQFKHHHHTSS-HHHHHHHHHaaaaaxabaaaaaaaaa
1rpx_C_2081rpx   C208224SAVFGAPDYAEAIKGIKHHHHTSS-HHHHHHHHHaaaaaxabaaaaaaaaa
2tps_A_2092tps   A209225SAISQAEDPESAARKFRHHHHTSS-HHHHHHHHHaaaaaxabaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dbt_A_2151dbt   A     U5PURIDINE-5'-MONOPHOSPHATE R - 215
1dbt_A_2151dbt   A     U5PURIDINE-5'-MONOPHOSPHATE S - 216
1dbt_A_2151dbt   A     U5PURIDINE-5'-MONOPHOSPHATE T - 218
1dvj_A_2031dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE R - 203
1dvj_A_2031dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE S - 204
1dvj_A_2031dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE Y - 206
1pii_*_2371pii   *     PO4PHOSPHATE ION S - 237
1pii_*_2371pii   *     PO4PHOSPHATE ION A - 238
1q6o_A_1921q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE R - 192
1q6o_A_1921q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE S - 193
1q6o_A_1921q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE R - 195
2tps_A_2092tps   A     TPSTHIAMIN PHOSPHATE S - 209
2tps_A_2092tps   A     TPSTHIAMIN PHOSPHATE A - 210

Clusters included in this Subclass
CLUSTER: HH.4.66
CLUSTER: HH.5.120