Logo
Information on SUBCLASS 3.7.2
Subclass Accession number: 9007
Subclass: 3.7.2 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 45.5 +/- 37.3
Average RMSD (Å) : 0.425 +/- 0.250

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: hXhpppX
(φψ)-conformation: aapabaa
Pattern: [KT][FILP][CF][GV][lt][DS][GS][FL][NV][IV][QT][DT][DNR][AE][QT][A][r][ADE][FY][FI][GK][QR]
Conservation:-0.102-1.7080.470-0.927-1.6060.2620.2620.262-0.9271.273-0.1020.085-0.436-0.387-0.1021.735-0.750-0.7102.5020.458-0.3760.822
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gz7_A_3431gz7   A343364TLFGLSSLNVTTDAQARAYFKQHHHHGGGTT--SHHHHHHHHHHaaaaaaaaaxabaaaaaaaaaa
1i50_B_3081i50   B315336KPCVEDGFVIQDRETALDFIGRHHHHHTTTT--SHHHHHHHHHHaaaaaaaaaxabaaaaaaaaaa
1llf_A_3431llf   A343364TIFGLSSLNVTTNAQARAYFKQHHHHGGGTT--SHHHHHHHHHHaaaaaaaaaxabaaaaaaaaaa
1lpp_*_3431lpp   -343364TFFGTSSLNVTTDAQAREYFKQHHHHGGGTT--SHHHHHHHHHHaaaaaaaaaxabaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gz7_A_3431gz7   A     NAGN-ACETYL-D-GLUCOSAMINE S - 348
1gz7_A_3431gz7   A     NAGN-ACETYL-D-GLUCOSAMINE S - 349
1gz7_A_3431gz7   A     NAGN-ACETYL-D-GLUCOSAMINE N - 351
1gz7_A_3431gz7   A     NAGN-ACETYL-D-GLUCOSAMINE V - 352
1gz7_A_3431gz7   A     NAGN-ACETYL-D-GLUCOSAMINE T - 353
1gz7_A_3431gz7   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 357
1gz7_A_3431gz7   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 364
1llf_A_3431llf   A     F23TRICOSANOIC ACID I - 344
1llf_A_3431llf   A     F23TRICOSANOIC ACID F - 345
1llf_A_3431llf   A     F23TRICOSANOIC ACID S - 349
1llf_A_3431llf   A     NAGN-ACETYL-D-GLUCOSAMINE T - 354
1llf_A_3431llf   A     NAGN-ACETYL-D-GLUCOSAMINE A - 358
1llf_A_3431llf   A     NAGN-ACETYL-D-GLUCOSAMINE A - 360
1llf_A_3431llf   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 361
1llf_A_3431llf   A     F23TRICOSANOIC ACID Y - 361
1llf_A_3431llf   A     F23TRICOSANOIC ACID F - 362
1llf_A_3431llf   A     F23TRICOSANOIC ACID S - 365
1lpp_*_3431lpp   *     HDS1-HEXADECANOSULFONIC ACID F - 344
1lpp_*_3431lpp   *     HDS1-HEXADECANOSULFONIC ACID F - 345
1lpp_*_3431lpp   *     HDS1-HEXADECANOSULFONIC ACID Y - 361
1lpp_*_3431lpp   *     HDS1-HEXADECANOSULFONIC ACID F - 362
1lpp_*_3431lpp   *     HDS1-HEXADECANOSULFONIC ACID S - 365
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gz7_A_3431gz7   A AC1NAG BINDING SITE FOR CHAIN AN - 351

Clusters included in this Subclass
CLUSTER: HH.7.24