Information on SUBCLASS 3.13.1 |
Subclass Accession number: 9018
Subclass: 3.13.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 9.4 +/- 14.8 Average RMSD (Å) : 0.950 +/- 0.173 Consensus geometry
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Consensus Sequence: | XpXXhpX |
(φψ)-conformation: | aabpgaa |
Pattern: | [EFL] | [EGKT] | [AEK] | [DENS] | x | x | [GY] | [HQWY] | x | [DER] | x | x | [GRS] | x | [FIV] | x |
Conservation: | -0.104 | -0.769 | 0.302 | 1.092 | -0.684 | -0.319 | 1.007 | 1.092 | -0.769 | 1.480 | -1.615 | -0.769 | 0.077 | -1.277 | 1.611 | -0.355 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a76_*_247 | 1a76 | - | 251 | 266 | LKKEVEYYDEIKRIFK | HHHHSTTHHHHHHHHH | aaaabxvaaaaaaaaa |
1ddg_A_492 | 1ddg | A | 492 | 507 | FTEDFLYQVEWQRYVK | HHHH-TTHHHHHHHHH | aaaaxpvaaaaaaaaa |
1iho_A_119 | 1iho | A | 119 | 134 | EGASRPGHFRGVSTIV | HHHHSTTHHHHHHHHH | aaaabxgaaaaaaaaa |
1mty_D_366 | 1mty | D | 372 | 387 | FEANYPGWYDHYGKIY | HHHHSTTHHHHHHHHH | aaaabpgaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iho_A_119 | 1iho | A | EDO1,2-ETHANEDIOL | G - 129 |
1iho_A_119 | 1iho | A | EDO1,2-ETHANEDIOL | V - 130 |
1iho_A_119 | 1iho | A | EDO1,2-ETHANEDIOL | I - 133 |
1iho_A_119 | 1iho | A | EDO1,2-ETHANEDIOL | V - 134 |
1iho_A_119 | 1iho | A | EDO1,2-ETHANEDIOL | L - 137 |
Clusters included in this Subclass |
CLUSTER: HH.2.135 |