Information on SUBCLASS 4.2.2 |
Subclass Accession number: 9038
Subclass: 4.2.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 36.4 +/- 31.2 Average RMSD (Å) : 0.550 +/- 0.311 Consensus geometry
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Consensus Sequence: | XpXphXXD |
(φψ)-conformation: | aalappaa |
Pattern: | [LY] | [EGP] | [AV] | [EK] | [EST] | [asv] | [il] | [AE] | [TY] | [KL] | [EKQ] | [GR] | [HNRS] | [GL] | [APS] | [HPS] | [D] | [IL] | [TV] | [ADE] | [EL] | [CQ] | [KL] | [KT] | [LV] | [EGR] | [AES] |
Conservation: | 0.800 | -0.880 | 0.378 | 1.068 | -0.313 | -1.371 | -1.179 | -0.111 | 0.509 | -0.308 | 0.575 | 0.376 | -0.428 | -1.236 | -0.426 | -0.605 | 3.624 | 1.014 | 0.558 | -0.488 | -0.725 | -0.096 | -0.308 | 0.235 | 0.667 | -0.903 | -0.426 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1brw_A_250 | 1brw | A | 251 | 277 | LEVKEAIETLKGNGPHDLTELCLTLGS | HHHHHHHHHHTT-S-HHHHHHHHHHHH | aaaaaaaaaaavaxxaaaaaaaaaaaa |
1d4a_A_67 | 1d4a | A | 67 | 93 | YPAESVLAYKEGHLSPDIVAEQKKLEA | HHHHHHHHHHHT-B-HHHHHHHHHHHH | aaaaaaaaaaavaxpaaaaaaaaaaaa |
1qr2_A_67 | 1qr2 | A | 67 | 93 | YGVETHEAYKQRSLASDITDEQKKVRE | HHHHHHHHHHTT-B-HHHHHHHHHHHH | aaaaaaaaaaalaxxaaaaaaaaaaaa |
1qrd_A_67 | 1qrd | A | 67 | 93 | YPVESSLAYKEGRLSPDIVAEQKKLEA | HHHHHHHHHHHT-B-HHHHHHHHHHHH | aaaaaaaaaaavaxpaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1brw_A_250 | 1brw | A | CACALCIUM ION | E - 252 |
1brw_A_250 | 1brw | A | CACALCIUM ION | E - 255 |
1brw_A_250 | 1brw | A | CACALCIUM ION | L - 268 |
1d4a_A_67 | 1d4a | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 67 |
1d4a_A_67 | 1d4a | A | FADFLAVIN-ADENINE DINUCLEOTIDE | P - 68 |
1qr2_A_67 | 1qr2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 68 |
1qr2_A_67 | 1qr2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 71 |
Clusters included in this Subclass |
CLUSTER: HH.4.114 |