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Information on SUBCLASS 4.10.1
Subclass Accession number: 9055
Subclass: 4.10.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 15.4 +/- 16.4
Average RMSD (Å) : 0.512 +/- 0.146

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXXhXXX
(φψ)-conformation: aagabpaa
Pattern: [apst]x[alv]x[aeks][adeqrs]x[EGQ]x[ilm][ADPS]xxx[ags][aeknst]
Conservation:0.076-0.7910.313-0.3300.052-0.425-0.0391.892-1.8631.4630.830-0.182-1.394-0.7591.241-0.083
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ezf_A_1771ezf   A184199SRLFSASEFEDPLVGEHHHHHHHTSS-HHHHHaaaaaaavabpaaaaa
1fur_A_421fur   A5671AKVNEDLGLLSEEKASHHHHHHTTSS-HHHHHaaaaaaavabxaaaaa
1ho8_A_271ho8   A2742WDALARSEELSEIDASHHHHHHTTSS-HHHHHaaaaaaavabbaaaaa
1jsw_A_471jsw   A5974AMANKELQTIPKSVANHHHHHHTT-S-HHHHHaaaaaaavaxxaaaaa
1p6x_A_1471p6x   A149164PAARYLLGDMSMCALMHHHHHHTTSS-HHHHHaaaaaaavabxaaaaa
1p6x_A_731p6x   A8095TQNRKQQGNLAVDDAAHHHHHHHTSS-HHHHHaaaaaaagabxaaaaa
1q5n_A_201q5n   A3550AQAQAQVGVIPQSAATHHHHHHTTSS-HHHHHaaaaaaavabxaaaaa
1yfm_*_681yfm   -8297AIVNESLGGLDPKISKHHHHHHTT-S-HHHHHaaaaaaavabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID G - 177
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID V - 179
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID G - 180
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID I - 181
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID L - 183
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID F - 187
1p6x_A_731p6x   A     THMTHYMIDINE I - 74
1p6x_A_731p6x   A     THMTHYMIDINE I - 77
1p6x_A_731p6x   A     THMTHYMIDINE Y - 78
1p6x_A_731p6x   A     THMTHYMIDINE Q - 102
1p6x_A_731p6x   A     THMTHYMIDINE F - 105
1p6x_A_731p6x   A     THMTHYMIDINE T - 106
1p6x_A_731p6x   A     THMTHYMIDINE Y - 109
1p6x_A_1471p6x   A     THMTHYMIDINE F - 148
1p6x_A_1471p6x   A     THMTHYMIDINE P - 149
1p6x_A_1471p6x   A     THMTHYMIDINE R - 152

Clusters included in this Subclass
CLUSTER: HH.4.163
CLUSTER: HH.4.82
CLUSTER: HH.6.39