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Information on SUBCLASS 4.18.1
Subclass Accession number: 9066
Subclass: 4.18.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 34.2 +/- 38.0
Average RMSD (Å) : 0.633 +/- 0.137

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XpcXXXhh
(φψ)-conformation: aagpppaa
Pattern: [al][ASV][kl][es][fkl][klm][DER][GK][kv]x[LT][AP][FGL]xx
Conservation:-0.7750.320-0.950-0.117-0.993-0.8101.2471.9990.247-0.9041.0921.418-0.726-0.645-0.402
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
13pk_A_39913pk   A400414ASLELLEGKTLPGVTHHHHGGG----HHHHaaaaaaavxxpaaaa
1oao_A_311oao   A3751LVKSKDDKVITAFDRHHHHHHHT---HHHHaaaaaaalbxbaaaa
1php_*_3741php   -375389ASLEFMEGKQLPGVVHHHHHHTT---HHHHaaaaaaagxxxaaaa
1pix_A_511pix   A5165DADVNKRGELTALQRHHHHHHTT---HHHHaaaaaaavbxxaaaa
1qpg_*_3941qpg   -395409ASLELLEGKELPGVAHHHHHHTS---HHHHaaaaaaagpbxaaaa
1vpe_*_3761vpe   -378392ASLEFLEGKELPGIAHHHHHHTSS--HHHHaaaaaaagxxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
13pk_A_39913pk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 399
13pk_A_39913pk   A     3PG3-PHOSPHOGLYCERIC ACID G - 399
13pk_A_39913pk   A     3PG3-PHOSPHOGLYCERIC ACID A - 400
1oao_A_311oao   A     GOLGLYCEROL K - 44
1oao_A_311oao   A     GOLGLYCEROL V - 45
1oao_A_311oao   A     GOLGLYCEROL I - 46
1oao_A_311oao   A     GOLGLYCEROL T - 47
1oao_A_311oao   A     GOLGLYCEROL R - 51
1php_*_3741php   *     ADPADENOSINE-5'-DIPHOSPHATE L - 377
1qpg_*_3941qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE L - 397
1vpe_*_3761vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 376
1vpe_*_3761vpe   *     3PG3-PHOSPHOGLYCERIC ACID G - 376
1vpe_*_3761vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 377
1vpe_*_3761vpe   *     3PG3-PHOSPHOGLYCERIC ACID G - 377
1vpe_*_3761vpe   *     3PG3-PHOSPHOGLYCERIC ACID A - 378
1vpe_*_3761vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 380
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oao_A_311oao   A BC3GOL BINDING SITE FOR CHAIN AI - 46

Clusters included in this Subclass
CLUSTER: HH.4.87
CLUSTER: HH.6.35