Logo
Information on SUBCLASS 5.1.1
Subclass Accession number: 9091
Subclass: 5.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 51

Average sequence ID (%) : 13.9 +/- 15.7
Average RMSD (Å) : 1.094 +/- 0.247

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXXXXhpXp
(φψ)-conformation: aalbpppaa
Pattern: xxxx[adegknrs]xx[afilmpvw][deknprst]x[adegknqrs]x[acfiklmv]
Conservation:-0.672-0.747-0.789-0.5311.892-0.909-0.400-0.0881.247-1.2351.1460.0271.058
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a41_*_2481a41   -260272AEVVGHTPSISKRHHHHSS---HHHHaaaagbxxpaaaa
1a59_*_1551a59   -161173WMTFGEEAAPEVVHHHHSS---HHHHaaaavbxxxaaaa
1a59_*_451a59   -5163LLWNSELPNDSELHHHHSS---HHHHaaaavbxxxaaaa
1aqu_A_2001aqu   A208220IEFLERKPSAELVHHHTT----HHHHaaaavbxwxaaaa
1bgv_A_3751bgv   A386398QNSERLSWTAEEVHHHHTS---HHHHaaaavbbxxaaaa
1bia_*_51bia   -1325LLANGEFHSGEQLHHTTSS-B-HHHHaaaavxxbxaaaa
1c96_A_181c96   A2941RKRLNRPLTLSEKHHHH-S---HHHHaaaalbpbxaaaa
1cfr_*_351cfr   -5062AIRLGGKISDGSFHHHHT-B--HHHHaaaavbbbxaaaa
1cke_A_1511cke   A162174LQVKGFSVNFERLHHHHT----HHHHaaaagxbbpaaaa
1csh_*_891csh   -95107LLVTGQIPTPEQVHHHHSS---HHHHaaaavbxxxaaaa
1cza_N_3481cza   N356368LTRLGVEPSDDDCHHHTT----HHHHaaaagxbxxaaaa
1dhs_*_1741dhs   -194206QNTEGVKWTPSKMHHHS-----HHHHaaaavxbxbaaaa
1dmt_A_2381dmt   A256268RQEERLPIDENQLHHHTT----HHHHaaaavbxbbaaaa
1e6v_A_1131e6v   A120132ERRLGKEVTPETIHHTT-----HHHHaaaavbxbbaaaa
1e6y_A_11241e6y   A11311143EKRLGKEVTPETIHHHH-----HHHHaaaavxxxbaaaa
1euz_A_3461euz   A357369QNINGYYWTEEEVHHHTT----HHHHaaaavbbxxaaaa
1g3m_A_1991g3m   A207219IHFLERKPSEELVHHHTT----HHHHaaaalbxwxaaaa
1hbn_A_1101hbn   A117129EKRLGKEVTPETIHHTS-----HHHHaaaavbxbbaaaa
1hm7_A_1791hm7   A187199ERAGRFEVPHRVFHHHTT----HHHHaaaalbbxpaaaa
1j2p_A_821j2p   A100112RLTYDIPITVKELHHHSSS---HHHHaaaalbxxxaaaa
1j2q_H_491j2q   H6779EIRRERKPTVRAIHHHHSS---HHHHaaaalbxxxaaaa
1j7l_A_2361j7l   A242254FDLLGIKPDWEKIHHHHTS---HHHHaaaavbxwbaaaa
1j99_A_1911j99   A199211CQFLGKTLEPEELHHHHT----HHHHaaaavbbbxaaaa
1jbw_A_2601jbw   A276288AKQTEWPLTPQNIHHHTT----HHHHaaaalbwbxaaaa
1k3p_A_821k3p   A88100ILLNGEKPTQEQYHHHHSS---HHHHaaaavbxxxaaaa
1kkh_A_1161kkh   A129141SGFYNKELKDDEIHHTTT----HHHHaaaalbxxxaaaa
1kqp_A_1081kqp   A119131QQETGDQLTDFNKHHHHS----HHHHaaaavbxxxaaaa
1l5j_A_8081l5j   A814826AALIGKLPTPEEYHHHHSB---HHHHaaaavbxxxaaaa
1ls6_A_2001ls6   A208220LEFVGHSLPEETVHHHHT----HHHHaaaavbbbxaaaa
1njg_A_1801njg   A191203LNEEHIAHEPRALHHHTT--B-HHHHaaaavbpbxaaaa
1nvt_A_2531nvt   A265277KIWTGVEPNIEVMHHHHSS---HHHHaaaavbxxxaaaa
1o7x_A_1521o7x   A158170LASFAREPTTDEIHHHHSS---HHHHaaaavbxxbaaaa
1o7x_A_441o7x   A5062LMLYGKLPTKKELHHHHSS---HHHHaaaavbxxxaaaa
1ojr_A_2531ojr   A260272GKRFGVTPLASALHHHHT----HHHHaaaavbbxpaaaa
1p77_A_2391p77   A251263HLWRGVMPDFVSVHHHHS----HHHHaaaavbxxxaaaa
1qq5_A_311qq5   A4961RALMGRYADFWSVHHHHT----HHHHaaaavbxbxaaaa
1qq5_A_581qq5   A7082LGTLGLEPDESFLHHHTT----HHHHaaaavxbxxaaaa
1qsm_A_191qsm   A3042QDFYEVSFPDDLDHHHTT----HHHHaaaavbbbxaaaa
1ryp_A_871ryp   A105117RYKYGYDMPCDVLHHHHSS---HHHHaaaavbxxxaaaa
1ryp_B_981ryp   B98110KRIYGEYPPTKLLHHHHSS---HHHHaaaavbxxxaaaa
1ryp_C_811ryp   C99111LKTYNEDIPVEILHHHHSS---HHHHaaaalbxxxaaaa
1ryp_D_791ryp   D97109RLTLEDPVTVEYLHHHHSS---HHHHaaaavbwxxaaaa
1ryp_E_851ryp   E100112NLYYDEDINVESLHHHHSS---HHHHaaaalbxxxaaaa
1ryp_G_811ryp   G99111KKLYKTPIPIPAFHHHHSS---HHHHaaaagxxppaaaa
1ryp_I_491ryp   I6779SLYTSREPRVVSAHHHHTS---HHHHaaaavbxxbaaaa
1ryp_J_481ryp   J6678KLKEERAIEPETFHHHHSS---HHHHaaaavbxpxaaaa
1ryp_K_491ryp   K6779SIREDYELSPQAVHHHHTS---HHHHaaaalbbpxaaaa
1ryp_L_491ryp   L6779ELREKERISVAAAHHHHSS---HHHHaaaalbxxxaaaa
1zrn_*_331zrn   -5163RSLMNRYVNFQQAHHHHT----HHHHaaaavbxbxaaaa
1zrn_*_601zrn   -7284CRHLGLDLDARTRHHHHT----HHHHaaaavxxbxaaaa
2tmg_A_3432tmg   A354366QDLQSFFWDLDQVHHHTT----HHHHaaaalbbxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a59_*_1551a59   *     CITCITRIC ACID L - 182
1a59_*_1551a59   *     CITCITRIC ACID Y - 183
1bgv_A_3751bgv   A     GLUGLUTAMIC ACID G - 376
1bgv_A_3751bgv   A     GLUGLUTAMIC ACID V - 377
1bgv_A_3751bgv   A     GLUGLUTAMIC ACID S - 380
1cza_N_3481cza   N     ADPADENOSINE-5'-DIPHOSPHATE H - 373
1cza_N_3481cza   N     ADPADENOSINE-5'-DIPHOSPHATE T - 376
1cza_N_3481cza   N     ADPADENOSINE-5'-DIPHOSPHATE I - 377
1cza_N_3481cza   N     ADPADENOSINE-5'-DIPHOSPHATE V - 378
1cza_N_3481cza   N     ADPADENOSINE-5'-DIPHOSPHATE F - 380
1cza_N_3481cza   N     ADPADENOSINE-5'-DIPHOSPHATE R - 381
1cza_N_3481cza   N     ADPADENOSINE-5'-DIPHOSPHATE N - 384
1dhs_*_1741dhs   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 176
1hbn_A_1101hbn   A     MGMAGNESIUM ION E - 117
1hbn_A_1101hbn   A     MGMAGNESIUM ION K - 122
1hbn_A_1101hbn   A     MGMAGNESIUM ION E - 123
1hbn_A_1101hbn   A     MGMAGNESIUM ION V - 124
1hbn_A_1101hbn   A     MGMAGNESIUM ION T - 125
1hbn_A_1101hbn   A     F43FACTOR 430 A - 139
1j2q_H_491j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE V - 49
1j2q_H_491j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE G - 50
1j2q_H_491j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE A - 52
1j2q_H_491j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE Q - 53
1j99_A_1911j99   A     HGIMERCURY (II) IODIDE E - 196
1j99_A_1911j99   A     HGIMERCURY (II) IODIDE C - 199
1j99_A_1911j99   A     HGIMERCURY (II) IODIDE Q - 200
1j99_A_1911j99   A     HGIMERCURY (II) IODIDE G - 203
1j99_A_1911j99   A     HGIMERCURY (II) IODIDE K - 204
1j99_A_1911j99   A     HGIMERCURY (II) IODIDE T - 205
1j99_A_1911j99   A     HGIMERCURY (II) IODIDE L - 206
1jbw_A_2601jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER Y - 260
1jbw_A_2601jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER Q - 261
1jbw_A_2601jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER R - 263
1jbw_A_2601jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER N - 264
1kkh_A_1161kkh   A     DIO1,4-DIETHYLENE DIOXIDE S - 116
1kkh_A_1161kkh   A     DIO1,4-DIETHYLENE DIOXIDE S - 117
1kkh_A_1161kkh   A     DIO1,4-DIETHYLENE DIOXIDE A - 118
1kqp_A_1081kqp   A     EDO1,2-ETHANEDIOL E - 121
1kqp_A_1081kqp   A     EDO1,2-ETHANEDIOL T - 122
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE F - 129
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE G - 132
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE N - 133
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE A - 136
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE R - 137
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE R - 139
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE Q - 143
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE Y - 144
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE G - 147
1kqp_A_1081kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE G - 148
1nvt_A_2531nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 253
1nvt_A_2531nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 254
1nvt_A_2531nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 255
1nvt_A_2531nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 256
1nvt_A_2531nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 257
1nvt_A_2531nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 259
1qq5_A_311qq5   A     FMTFORMIC ACID R - 39
1qq5_A_311qq5   A     FMTFORMIC ACID F - 58
1qsm_A_191qsm   A     ACOACETYL COENZYME *A Y - 29
1qsm_A_191qsm   A     ACOACETYL COENZYME *A F - 32
1qsm_A_191qsm   A     ACOACETYL COENZYME *A Y - 33
1ryp_E_851ryp   E     MGMAGNESIUM ION Y - 103
1ryp_E_851ryp   E     MGMAGNESIUM ION D - 104
1ryp_E_851ryp   E     MGMAGNESIUM ION E - 105
1ryp_A_871ryp   A     MGMAGNESIUM ION I - 127
1ryp_A_871ryp   A     MGMAGNESIUM ION Y - 128
1ryp_A_871ryp   A     MGMAGNESIUM ION T - 129
1ryp_A_871ryp   A     MGMAGNESIUM ION Q - 130
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ojr_A_2531ojr   A GO1GOL BINDING SITE FOR CHAIN AF - 263

Clusters included in this Subclass
CLUSTER: HH.4.5
CLUSTER: HH.5.1
CLUSTER: HH.5.168
CLUSTER: HH.6.0
CLUSTER: HH.6.107
CLUSTER: HH.8.18