Information on SUBCLASS 5.3.1 |
Subclass Accession number: 9098
Subclass: 5.3.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 19.7 +/- 23.3 Average RMSD (Å) : 0.800 +/- 0.287 Consensus geometry
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Consensus Sequence: | hXcXXhXXX |
(φψ)-conformation: | aalppppaa |
Pattern: | x | [AEKS] | x | [altv] | [HKMRY] | x | [flmpv] | [dqsy] | [deknq] | [acfilm] | [anstv] | [GKNS] | x | [hkprs] | [AIV] | [ANPST] | [adekt] | [aens] | [agilm] | [AERT] | [giklm] |
Conservation: | -0.859 | 0.966 | -1.079 | -0.127 | 0.204 | -0.650 | -0.309 | -0.605 | 0.287 | -0.902 | -0.881 | 1.347 | 0.598 | -0.108 | 2.831 | 1.302 | -0.200 | -0.106 | -0.878 | 0.448 | -1.279 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5t_A_217 | 1b5t | A | 217 | 237 | FKQAKKFADMTNVRIPAWMAQ | HHHHHHHHHTTT----HHHHH | aaaaaaaaaaavxxxwaaaaa |
1cc1_L_74 | 1cc1 | L | 79 | 99 | TASVMAQDDAFGVKVTTNGRI | HHHHHHHHHHHT----HHHHH | aaaaaaaaaaavxbxxaaaaa |
1frf_L_78 | 1frf | L | 81 | 101 | LASSRCVDDAVKVSIPANARM | HHHHHHHHHHHT----HHHHH | aaaaaaaaaaavbbpxaaaaa |
1i74_A_119 | 1i74 | A | 120 | 140 | SSIVYRLYKENGVAIPKEIAG | HHHHHHHHHHHT----HHHHH | aaaaaaaaaaavxxxxaaaaa |
1k20_A_121 | 1k20 | A | 122 | 142 | SSIVYRMFKEHSVAVSKEIAG | HHHHHHHHHHTT----HHHHH | aaaaaaaaaaalbxbxaaaaa |
1m1n_B_321 | 1m1n | B | 326 | 346 | DEFLMKVSEISGQPIPASLTK | HHHHHHHHHHH-----HHHHH | aaaaaaaaaaavxxxxaaaaa |
1pn9_A_104 | 1pn9 | A | 108 | 128 | FADYHYPQIFAKQPANPENEK | HHHHHHHHHHH-----HHHHH | aaaaaaaaaaalxwpbaaaaa |
1qgu_B_318 | 1qgu | B | 322 | 342 | DELLMTVSQLSGKPIADALTL | HHHHHHHHHHH-----HHHHH | aaaaaaaaaaavxxxxaaaaa |
1ubk_L_87 | 1ubk | L | 90 | 110 | LASTRCVDNAVGVHIPKNATY | HHHHHHHHHHHT----HHHHH | aaaaaaaaaaavxbxxaaaaa |
2frv_B_71 | 2frv | B | 74 | 94 | LASVRAVDNCVGVKIPENATL | HHHHHHHHHHHT----HHHHH | aaaaaaaaaaavxbxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.6.11 |