Information on SUBCLASS 5.15.1 |
Subclass Accession number: 9119
Subclass: 5.15.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 34.3 +/- 26.3 Average RMSD (Å) : 0.400 +/- 0.200 Consensus geometry
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Consensus Sequence: | ppcXXXXXp |
(φψ)-conformation: | aalapapaa |
Pattern: | [AKNR] | [HY] | [FY] | [AIKV] | [DN] | [L] | [EQR] | [EKNS] | [GKNQ] | [CDK] | x | x | x | x | [KS] | x | [Q] | [EQR] |
Conservation: | -0.825 | 1.661 | 1.572 | -1.108 | 0.937 | 1.111 | 0.123 | -0.503 | -0.825 | -1.041 | 0.215 | -0.646 | -0.781 | -1.045 | 0.017 | -0.683 | 1.756 | 0.066 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gwu_A_232 | 1gwu | A | 232 | 249 | KYYVNLEEQKGLIQSDQE | HHHHHHHTT--SSHHHHH | aaaaaaaavaxaxaaaaa |
1mk0_A_24 | 1mk0 | A | 30 | 47 | RHFKDLEKGCHSSIKLQR | HHHHHHHHT--S-HHHHH | aaaaaaaavaxabaaaaa |
1pa2_A_231 | 1pa2 | A | 231 | 248 | NYFANLQSNDGLLQSDQE | HHHHHHHTT--SSHHHHH | aaaaaaaavaxaxaaaaa |
1sch_A_224 | 1sch | A | 224 | 241 | AYYINLRNKKGLLHSDQQ | HHHHHHHTT--SSHHHHH | aaaaaaaalaxaxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1sch_A_224 | 1sch | A | APHPROXIMAL HEME POCKET. | D - 239 |
Clusters included in this Subclass |
CLUSTER: HH.5.80 |