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Information on SUBCLASS 5.20.1
Subclass Accession number: 9124
Subclass: 5.20.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 51.5 +/- 3.6
Average RMSD (Å) : 0.133 +/- 0.058

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: pATThTPGX
(φψ)-conformation: aabpbbpea
Pattern: [ADE][G][ST][HKN][A][T][T][CIV][T][P][G][PR][RW][NY][IL][EKS][KRW][M][L][KQR][AS][AT]
Conservation:-1.2601.524-0.365-0.8530.3020.9130.913-0.8530.9132.1361.524-0.715-0.142-0.708-0.287-1.057-1.2600.9130.302-0.581-0.582-0.776
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e9y_B_1651e9y   B165186DGTNATTITPGRRNLKWMLRAAHHHHH-----HHHHHHHHHHHHaaaaabxbbxeaaaaaaaaaaa
1ejx_C_11631ejx   C11631184AGTHATTCTPGPWYISRMLQAAHHHHHSS---HHHHHHHHHHHHaaaaabxbbxeaaaaaaaaaaa
4ubp_C_1664ubp   C166187EGSKATTVTPGPWNIEKMLKSTHHHHHSS---HHHHHHHHHHHHaaaaabxbbxeaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e9y_B_1651e9y   B     HAEACETOHYDROXAMIC ACID N - 168
1e9y_B_1651e9y   B     KCXLYSINE NZ-CARBOXYLIC ACID A - 169
1e9y_B_1651e9y   B     HAEACETOHYDROXAMIC ACID A - 169
1e9y_B_1651e9y   B     NINICKEL (II) ION A - 169
1e9y_B_1651e9y   B     KCXLYSINE NZ-CARBOXYLIC ACID T - 170
1e9y_B_1651e9y   B     HAEACETOHYDROXAMIC ACID T - 170
1e9y_B_1651e9y   B     NINICKEL (II) ION T - 170
1e9y_B_1651e9y   B     KCXLYSINE NZ-CARBOXYLIC ACID T - 171
1e9y_B_1651e9y   B     NINICKEL (II) ION T - 171
1e9y_B_1651e9y   B     KCXLYSINE NZ-CARBOXYLIC ACID I - 172
1ejx_C_11631ejx   C     KCXLYSINE NZ-CARBOXYLIC ACID A - 1167
1ejx_C_11631ejx   C     NINICKEL (II) ION A - 1167
1ejx_C_11631ejx   C     KCXLYSINE NZ-CARBOXYLIC ACID T - 1168
1ejx_C_11631ejx   C     NINICKEL (II) ION T - 1168
1ejx_C_11631ejx   C     KCXLYSINE NZ-CARBOXYLIC ACID T - 1169
1ejx_C_11631ejx   C     NINICKEL (II) ION T - 1169
1ejx_C_11631ejx   C     KCXLYSINE NZ-CARBOXYLIC ACID C - 1170
4ubp_C_1664ubp   C     HAEACETOHYDROXAMIC ACID K - 169
4ubp_C_1664ubp   C     KCXLYSINE NZ-CARBOXYLIC ACID A - 170
4ubp_C_1664ubp   C     NINICKEL (II) ION A - 170
4ubp_C_1664ubp   C     HAEACETOHYDROXAMIC ACID A - 170
4ubp_C_1664ubp   C     HAEACETOHYDROXAMIC ACID T - 171
4ubp_C_1664ubp   C     KCXLYSINE NZ-CARBOXYLIC ACID T - 172
4ubp_C_1664ubp   C     NINICKEL (II) ION T - 172
4ubp_C_1664ubp   C     HAEACETOHYDROXAMIC ACID T - 172
4ubp_C_1664ubp   C     KCXLYSINE NZ-CARBOXYLIC ACID V - 173

Clusters included in this Subclass
CLUSTER: HH.4.188