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Information on SUBCLASS 6.1.1
Subclass Accession number: 9127
Subclass: 6.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 15.8 +/- 16.4
Average RMSD (Å) : 0.873 +/- 0.323

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pphpXpXphp
(φψ)-conformation: aapbaapbaa
Pattern: [egqrst]xx[afltv][ekqty][aegqrst]x[fl][dehkqt]x[dehnqry][FLTWY][hknrty][dps][DEGNST]x[EGKNST][FILTV][DEKPS][ADEQ][AGIKL]xx[ailt][AGILVY][iklv]x[acst][ailmv][agkqrst]
Conservation:-0.654-1.139-1.266-0.1330.164-1.046-1.2442.011-0.230-0.560-0.5991.711-0.3760.3391.3330.2770.4090.4890.9322.624-0.211-0.811-1.2170.512-0.701-0.5960.1430.846-0.010-0.996
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bqb_A_2471bqb   A251280EQIYYRALTEYLTSNSNFKDLKDALYQAAKHHHHHHHHHHT--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaaxbaaaaaaaaaaaaa
1j2p_A_1691j2p   A169198RMAVTEFFEKEYRDDLSFDDAMVLGLVAMGHHHHHHHHHHH--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaapbaaaaaaaaaaaaa
1j2q_H_1311j2q   H131160SLTAYGVLEDRFTPEIGVDEAVELAVRAIYHHHHHHHHHHH--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaapbaaaaaaaaaaaaa
1k4t_A_5881k4t   A595624SITLQQQLKELTAPDENIPAKILSYNRANRHHHHHHHHHHH--TT--HHHHHHHHHHHHHaaaaaaaaaaaxxaaxxaaaaaaaaaaaaa
1kei_A_2601kei   A264293GKIFYRALTQYLTPTSNFSQLRAAAVQSATHHHHHHHHHHT--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaapbaaaaaaaaaaaaa
1rlr_*_381rlr   -3867ISQVELRSHIQFYDGIKTSDIHETIIKAAAHHHHHHHHHTT--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaaxxaaaaaaaaaaaaa
1ryp_B_1681ryp   B168197SVAAKTFLEKRWNDELELEDAIHIALLTLKHHHHHHHHHHH--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaaxxaaaaaaaaaaaaa
1ryp_C_1691ryp   C169198TSAAQTLLQMDYKDDMKVDDAIELALKTLSHHHHHHHHHHH--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaapbaaaaaaaaaaaaa
1ryp_E_1761ryp   E176205SEGAQAELLNEWHSSLTLKEAELLVLKILKHHHHHHHHHHH--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaaxbaaaaaaaaaaaaa
1ryp_K_1351ryp   K136165GFYTFSLLDHHYRPDMTTEEGLDLLKLCVQHHHHHHHHHHH--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaaxxaaaaaaaaaaaaa
1ryp_L_1331ryp   L133162QTFAYGVLDSNYKWDLSVEDALYLGKRSILHHHHHHHHHHH--TT--HHHHHHHHHHHHHaaaaaaaaaaaxbaaxxaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1k4t_A_5881k4t   A     HGMERCURY (II) ION F - 589
1k4t_A_5881k4t   A     PTRO-PHOSPHOTYROSINE R - 590
1k4t_A_5881k4t   A     HGMERCURY (II) ION R - 590
1k4t_A_5881k4t   A     PTRO-PHOSPHOTYROSINE T - 591
1k4t_A_5881k4t   A     HGMERCURY (II) ION T - 591
1k4t_A_5881k4t   A     PTRO-PHOSPHOTYROSINE Y - 592
1k4t_A_5881k4t   A     HGMERCURY (II) ION N - 593
1k4t_A_5881k4t   A     PTRO-PHOSPHOTYROSINE A - 594
1k4t_A_5881k4t   A     HGMERCURY (II) ION A - 594
1k4t_A_5881k4t   A     PTRO-PHOSPHOTYROSINE S - 595
1k4t_A_5881k4t   A     PTRO-PHOSPHOTYROSINE V - 626
1k4t_A_5881k4t   A     HGMERCURY (II) ION V - 626
1k4t_A_5881k4t   A     HGMERCURY (II) ION L - 629
1ryp_L_1331ryp   L     MGMAGNESIUM ION A - 164
1ryp_L_1331ryp   L     MGMAGNESIUM ION A - 165
1ryp_L_1331ryp   L     MGMAGNESIUM ION H - 166
1ryp_L_1331ryp   L     MGMAGNESIUM ION R - 167

Clusters included in this Subclass
CLUSTER: HH.5.27
CLUSTER: HH.6.28
CLUSTER: HH.7.13
CLUSTER: HH.7.23