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Information on SUBCLASS 6.2.1
Subclass Accession number: 9129
Subclass: 6.2.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 14.3 +/- 13.8
Average RMSD (Å) : 0.725 +/- 0.340

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XphpXchXXX
(φψ)-conformation: aapbpgppaa
Pattern: [FMVY][AG]x[ACL]x[AKS]x[FLWY][EHKR][EPQ][DGN][LM][EGST][KP][EL][DE][ALTV][AFIV][ADEK]x[AIV]
Conservation:-0.1770.830-1.2890.538-0.660-0.026-1.1580.4760.0190.4540.6461.668-0.9620.8830.0312.347-0.766-0.701-0.701-1.7470.293
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j33_A_1951j33   A205225VARALARLHPGMGPLEVAAEVHHHHHTT--TT--HHHHHHHHaaaaaaaxbxgpxaaaaaaaa
1ryp_H_1351ryp   H135155YGYCDKNFRENMSKEETVDFIHHHHHHH--TT--HHHHHHHHaaaaaaaxbxvxxaaaaaaaa
1ryp_I_1311ryp   I135155MAVLESHWKQDLTKEEAIKLAHHHHHHH--SS--HHHHHHHHaaaaaaaxbxvxxaaaaaaaa
1ryp_J_1341ryp   J138158FGMCESLYEPNLEPEDLFETIHHHHHHH--SS--HHHHHHHHaaaaaaaxbxlxxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ryp_J_1341ryp   J     MGMAGNESIUM ION S - 134
1ryp_J_1341ryp   J     MGMAGNESIUM ION D - 135
1ryp_H_1351ryp   H     MGMAGNESIUM ION A - 162
1ryp_I_1311ryp   I     MGMAGNESIUM ION G - 162
1ryp_H_1351ryp   H     MGMAGNESIUM ION I - 163
1ryp_H_1351ryp   H     MGMAGNESIUM ION K - 164
1ryp_I_1311ryp   I     MGMAGNESIUM ION W - 164
1ryp_H_1351ryp   H     MGMAGNESIUM ION W - 165
1ryp_I_1311ryp   I     MGMAGNESIUM ION N - 165
1ryp_J_1341ryp   J     MGMAGNESIUM ION A - 165
1ryp_J_1341ryp   J     MGMAGNESIUM ION A - 166

Clusters included in this Subclass
CLUSTER: HH.7.43