ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.2.2

Subclass Accession number: 9130
Subclass: 6.2.2

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 19.5 +/- 18.6
Average RMSD (Å) : 0.600 +/- 0.183

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	phhXXXhXXp
(φψ)-conformation:	aapbpgppaa

Pattern:	[EHKR]	[AGL]	[ACGM]	[ER]	[AI]	[AT]	[DKQ]	x	[AGSV]	x	x	[AKL]	[AV]	[ILV]	[EKRS]	[ALMV]	[ALV]	[GKR]	[ADP]	[GQ]	[IMV]	x	x	x	[E]	[ILV]	[AG]	[AEKL]	x	[AI]	[EQT]	[KNQ]	[AEFM]	[IMV]	x
Conservation:	0.156	-1.069	-0.924	0.912	0.480	0.861	0.303	-0.634	-0.810	-1.487	-1.151	-0.661	0.732	1.175	-0.071	-0.185	-0.177	0.031	-0.021	0.942	1.056	-1.493	-0.597	-0.981	3.170	0.997	0.862	-1.151	-0.162	0.350	0.324	0.564	-1.265	1.018	-1.095

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c24_A_120	1c24	A	124	158	RLCRITQESLYLALRMVKPGINLREIGAAIQKFVE	HHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaxbpvxxaaaaaaaaaaaaa
1chm_A_161	1chm	A	169	203	HGARIADIGGAAVVEALGDQVPEYEVALHATQAMV	HHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaxbxvxxaaaaaaaaaaaaa
1xgs_A_106	1xgs	A	106	140	ELMEAAKEALNAAISVARAGVEIKELGKAIENEIR	HHHHHHHHHHHHHHHH-STT-BTHHHHHHHHHHHH	aaaaaaaaaaaaaaaaxbxgxxaaaaaaaaaaaaa
1xgs_A_3	1xgs	A	8	42	KAGEIAKKVREKAIKLARPGMLLLELAESIEKMIM	HHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaxbpvxxaaaaaaaaaaaaa

Clusters included in this Subclass