ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.6.1

Subclass Accession number: 9135
Subclass: 6.6.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 23.7 +/- 23.7
Average RMSD (Å) : 0.780 +/- 0.460

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	phGCXXppXX
(φψ)-conformation:	aalbpaabaa

Pattern:	x	x	[lwy]	[AV]	[ek]	[EKQR]	[ILMV]	[AG]	x	[KNRT]	[ALVY]	[GN]	[CE]	[DKNP]	[LTV]	[DGNST]	[DST]	[adst]	[ADES]	x	[FLM]	[AILV]	x	[AC]	[L]	[KRW]	x
Conservation:	-0.332	-1.517	-0.611	0.587	-0.338	0.426	0.537	0.597	-0.696	-0.270	-0.740	1.525	1.578	-0.546	-0.116	-0.544	0.034	-1.160	-0.486	-1.345	0.519	-0.251	-0.127	2.707	1.767	-0.100	-1.098

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ea5_A_238	1ea5	A	242	268	RRRAVELGRNLNCNLNSDEELIHCLRE	HHHHHHHHHHTT---SSHHHHHHHHHH	aaaaaaaaaaalxxaabaaaaaaaaaa
1f6w_A_233	1f6w	A	234	260	LFWAKKVAEKVGCPVGDAARMAQCLKV	HHHHHHHHHHHT---S-HHHHHHHHHH	aaaaaaaaaaavxwaabaaaaaaaaaa
1j5s_A_190	1j5s	A	191	217	REYVEKMGERYGEDTSTLDGFLNALWK	HHHHHHHHHHHTS-TTSHHHHHHHHHH	aaaaaaaaaaavbxaabaaaaaaaaaa
1mx1_A_1262	1mx1	A	1262	1288	KPLAEQIAITAGCKTTTSAVMVHCLRQ	HHHHHHHHHHTT---SSHHHHHHHHHH	aaaaaaaaaaavbxaabaaaaaaaaaa
2bce_*_233	2bce	-	234	260	LFWAKRIAEKVGCPVDDTSKMAGCLKI	HHHHHHHHHHHT---SSHHHHHHHHHH	aaaaaaaaaaavbwaabaaaaaaaaaa

Clusters included in this Subclass