Logo
Information on SUBCLASS 6.26.1
Subclass Accession number: 9155
Subclass: 6.26.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 31.7 +/- 16.3
Average RMSD (Å) : 0.633 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXCPpXLXhp
(φψ)-conformation: aapaalppaa
Pattern: [ANP][C]x[DKS][SV][C][P][KT]x[L][DNP][ILP][KQT][RS][AFK][I][AGT][HSY][IL][KRS]
Conservation:-0.7622.385-0.762-0.507-0.6032.3851.619-0.221-0.2940.471-0.422-0.762-0.507-0.366-0.9320.471-0.592-0.3370.116-0.379
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gte_A_861gte   A86105PCQKSCPTHLDIKSFITSISHHHHTSTT---HHHHHHHHHaaaaaxaalpxaaaaaaaaa
1nek_B_2111nek   B211230NCVSVCPKGLNPTRAIGHIKHHHHH-TT---HHHHHHHHHaaaaapaavxbaaaaaaaaa
1qla_B_2131qla   B213232ACHDVCPKNLPLQSKIAYLRHHHHH-TT---HHHHHHHHHaaaaapaalxxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER P - 86
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER C - 87
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER Q - 88
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER S - 90
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER C - 91
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER P - 92
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER T - 93
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER H - 94
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER L - 95
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER I - 97
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER K - 98
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER F - 100
1gte_A_861gte   A     FS4IRON/SULFUR CLUSTER I - 101
1nek_B_2111nek   B     F3SFE3-S4 CLUSTER N - 211
1nek_B_2111nek   B     FS4IRON/SULFUR CLUSTER C - 212
1nek_B_2111nek   B     F3SFE3-S4 CLUSTER C - 212
1nek_B_2111nek   B     F3SFE3-S4 CLUSTER V - 213
1nek_B_2111nek   B     FS4IRON/SULFUR CLUSTER V - 215
1nek_B_2111nek   B     FS4IRON/SULFUR CLUSTER C - 216
1nek_B_2111nek   B     FS4IRON/SULFUR CLUSTER P - 217
1nek_B_2111nek   B     FS4IRON/SULFUR CLUSTER K - 218
1nek_B_2111nek   B     FS4IRON/SULFUR CLUSTER G - 219
1nek_B_2111nek   B     FS4IRON/SULFUR CLUSTER L - 220
1nek_B_2111nek   B     FS4IRON/SULFUR CLUSTER P - 222
1nek_B_2111nek   B     F3SFE3-S4 CLUSTER P - 222
1nek_B_2111nek   B     F3SFE3-S4 CLUSTER T - 223
1nek_B_2111nek   B     F3SFE3-S4 CLUSTER I - 226
1qla_B_2131qla   B     F3SFE3-S4 CLUSTER A - 213
1qla_B_2131qla   B     F3SFE3-S4 CLUSTER C - 214
1qla_B_2131qla   B     FS4IRON/SULFUR CLUSTER C - 214
1qla_B_2131qla   B     F3SFE3-S4 CLUSTER H - 215
1qla_B_2131qla   B     FS4IRON/SULFUR CLUSTER V - 217
1qla_B_2131qla   B     FS4IRON/SULFUR CLUSTER C - 218
1qla_B_2131qla   B     FS4IRON/SULFUR CLUSTER P - 219
1qla_B_2131qla   B     FS4IRON/SULFUR CLUSTER K - 220
1qla_B_2131qla   B     FS4IRON/SULFUR CLUSTER N - 221
1qla_B_2131qla   B     FS4IRON/SULFUR CLUSTER L - 222
1qla_B_2131qla   B     FS4IRON/SULFUR CLUSTER L - 224
1qla_B_2131qla   B     F3SFE3-S4 CLUSTER I - 228
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gte_A_861gte   A FA2FS4 BINDING SITE FOR CHAIN AP - 86
1gte_A_861gte   A FA1FS4 BINDING SITE FOR CHAIN AC - 91
1gte_A_861gte   A FA1FS4 BINDING SITE FOR CHAIN AP - 92
1gte_A_861gte   A FA1FS4 BINDING SITE FOR CHAIN AI - 97
1qla_B_2131qla   B FS5FE3S4 IRON SULPHUR CENTRE LIGANDS FOR CHAIN BC - 214
1qla_B_2131qla   B FS1FE4S4 IRON SULPHUR CENTRE LIGANDS FOR CHAIN BC - 218

Clusters included in this Subclass
CLUSTER: HH.6.118