Information on SUBCLASS 7.4.1 |
Subclass Accession number: 9162
Subclass: 7.4.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 42.1 +/- 24.5 Average RMSD (Å) : 0.417 +/- 0.117 Consensus geometry
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Consensus Sequence: | XQRXhMVQTpX |
(φψ)-conformation: | aabplplabaa |
Pattern: | [IMV] | [fkqy] | [GKQ] | [ftv] | [ILV] | [kqst] | x | [ILMV] | [R] | [AKST] | [QY] | [R] | [cnps] | [agy] | [LM] | [IV] | [Q] | [T] | [DEP] | [ad] | [Q] | [LY] | x | [fl] | [ci] | [HY] | x | [A] | [AILV] | [ail] | [EHQ] | [afgy] |
Conservation: | 0.273 | -1.154 | -0.631 | -1.023 | 0.295 | -1.053 | -1.191 | 0.035 | 1.548 | -0.577 | 0.292 | 1.548 | -1.228 | -1.020 | 0.838 | 0.759 | 1.548 | 1.548 | 0.015 | -0.909 | 1.548 | 0.773 | -0.872 | -0.379 | -0.729 | 1.646 | -0.955 | 0.982 | -0.332 | -0.951 | 0.248 | -0.890 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fpr_A_486 | 1fpr | A | 486 | 517 | IQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQF | HHHHHHHHHTTSTTSS-SSHHHHHHHHHHHHH | aaaaaaaaaaabxgpvabaaaaaaaaaaaaaa |
1l8k_A_244 | 1l8k | A | 244 | 275 | IKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEG | HHHHHHHHTTTBTT-S-SHHHHHHHHHHHHHH | aaaaaaaaaaabxvpMabaaaaaaaaaaaaaa |
1lar_A_1550 | 1lar | A | 1550 | 1581 | IYGHVTCMRSQRNYMVQTEDQYVFIHEALLEA | HHHHHHHHHTTSTTSS-SHHHHHHHHHHHHHH | aaaaaaaaaaabplpvabaaaaaaaaaaaaaa |
1lar_A_1841 | 1lar | A | 1841 | 1872 | MFQTVKTLRTQRPAMVQTEDQYQLCYRAALEY | HHHHHHHHTTTSTTSS-SHHHHHHHHHHHHHH | aaaaaaaaaaabxvpvabaaaaaaaaaaaaaa |
1yfo_A_461 | 1yfo | A | 461 | 492 | VYGFVSRIRAQRCQMVQTDMQYVFIYQALLEH | HHHHHHHHTTTSTTSS-SHHHHHHHHHHHHHH | aaaaaaaaaaabxlxvabaaaaaaaaaaaaaa |
2shp_A_490 | 2shp | A | 490 | 521 | VPKTIQMVRSQRSGMVQTEAQYRSIYMAVQHY | HHHHHHHHHTTSTTSS--HHHHHHHHHHHHHH | aaaaaaaaaaabxvpMabaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fpr_A_486 | 1fpr | A | PTRO-PHOSPHOTYROSINE | Q - 502 |
1fpr_A_486 | 1fpr | A | PTRO-PHOSPHOTYROSINE | Q - 506 |
2shp_A_490 | 2shp | A | CATDODECANE-TRIMETHYLAMINE | Q - 510 |
2shp_A_490 | 2shp | A | CATDODECANE-TRIMETHYLAMINE | S - 513 |
2shp_A_490 | 2shp | A | CATDODECANE-TRIMETHYLAMINE | I - 514 |
2shp_A_490 | 2shp | A | CATDODECANE-TRIMETHYLAMINE | M - 516 |
2shp_A_490 | 2shp | A | CATDODECANE-TRIMETHYLAMINE | A - 517 |
Clusters included in this Subclass |
CLUSTER: HH.9.8 |