ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.3.1

Subclass Accession number: 9197
Subclass: 9.3.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 58.6 +/- 21.1
Average RMSD (Å) : 0.540 +/- 0.152

Consensus geometry

d (Å): 25

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	hppKhLFXGppph
(φψ)-conformation:	aalbpabppabaa

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	0.228	1.076	-0.156	3.197	0.228	-0.349	1.076	2.349	0.228	-0.304	-0.440	0.652	0.652	-0.603	-0.620	-0.943	0.075	-1.309	0.228	1.076	-0.751	1.076	-1.024	-0.403	-0.885	-0.292	1.076	0.652	-0.565	-1.441	-0.418	0.035	-0.699	-0.805	-1.091	-0.811

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bi8_A_199	1bi8	A	200	235	VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI	HHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHHH	aaaaaaaaaaaaaaalbpaxbxabaaaaaaaaaaaa
1blx_A_199	1blx	A	200	235	VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaalbpabbxabaaaaaaaaaaaa
1cm8_A_207	1cm8	A	207	242	VDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT	HHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHHH	aaaaaaaaaaaaaaagbxabxxabaaaaaaaaaaaa
1gz8_A_183	1gz8	A	184	219	VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL	HHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbpabwxabaaaaaaaaaaaa
1pmn_A_244	1pmn	A	244	279	VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL	HHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHHH	aaaaaaaaaaaaaaavbpabxeabaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass