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Information on SUBCLASS 1.1.12
Subclass Accession number: 948
Subclass: 1.1.12 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 32

Average sequence ID (%) : 10.7 +/- 15.2
Average RMSD (Å) : 0.419 +/- 0.109

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXpXp
(φψ)-conformation: bbpaa
Pattern: xxx[dehknpst][dehknpqst][dehknpqrs][adegkqrt]x
Conservation:-0.595-1.030-0.1561.028-0.6180.5351.739-0.902
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoe_A_1561aoe   A157164TKQPKSELEE--HHHHbxxxaaaa
1dzf_A_1521dzf   A154161IRLSSDEKEE--HHHHbxxxaaaa
1e29_A_181e29   A1926TTLTARQFEE--HHHHbbxxaaaa
1eu1_A_811eu1   A8289VRVTWDEAEE--HHHHbxbxaaaa
1ezv_E_1141ezv   E119126RHRTPHEIEE--HHHHbxxxaaaa
1g29_1_2641g29   1265272LKLLPDQFEE--HHHHbxxxaaaa
1g3s_A_2091g3s   A211218VELLDDLAEE--HHHHbxxxaaaa
1g8k_A_1311g8k   A132139VDTTWDHAEE--HHHHbxbxaaaa
1gs5_A_1561gs5   A157164MNVNADQAEE--HHHHbxbpaaaa
1hxx_A_1851hxx   A194201ADRTNLQEEE--HHHHbxbxaaaa
1ile_*_1861ile   -186193TPLSSHEVEE--HHHHbxbbaaaa
1iyk_A_2911iyk   A293300QLFTEEEFEE--HHHHxbbxaaaa
1jce_A_1961jce   A196203VAIGERTAEE--HHHHbxbxaaaa
1jhd_A_1191jhd   A121128EEVSDEQMEE--HHHHbxxxaaaa
1jhd_A_331jhd   A3441VVISSQAAEE--HHHHbxxxaaaa
1jj2_V_1391jj2   V139146GKHDTEGIEE--HHHHexbxaaaa
1m4z_A_1461m4z   A151158NVMDGSKWEEE-HHHHbxbxaaaa
1obd_A_1721obd   A172179ENISPAQAEE--HHHHbxbxaaaa
1oo0_A_471oo0   A5158AFVHQSVMEE--HHHHbbbxaaaa
1ooy_A_3341ooy   A339346SYFSSDESEE--HHHHbbbxaaaa
1os1_A_3711os1   A372379SRLTADQTEE--HHHHbxxxaaaa
1poi_B_781poi   B8087CIWPNVRFEE--HHHHbxxxaaaa
1q74_A_2251q74   A227234VEADEQAREE--HHHHbbxxaaaa
1rie_*_941rie   -99106RHRTKKEIEE--HHHHbxxxaaaa
1sqh_A_101sqh   A1118RPLSDSEVEE--HHHHbxxxaaaa
1ua4_A_321ua4   A3744KYLDSKDLEE--HHHHbxpbaaaa
1v47_A_71v47   A815LEIGEDEREE--HHHHbxbxaaaa
1vjl_A_1391vjl   A139146IELEVNEREE--HHHHbxxxaaaa
2ebn_*_572ebn   -6067VSNNPNVQEE--HHHHxbbxaaaa
2uag_A_1532uag   A156163LELSSFQLEE--HHHHbxbxaaaa
4cd2_A_1694cd2   A170177KKEKHSDLEE--HHHHbxxxaaaa
7req_A_1137req   A115122VAFDLPTHEEB-HHHHxbbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e29_A_181e29   A     HECHEME C I - 32
1e29_A_181e29   A     CACALCIUM ION I - 32
1e29_A_181e29   A     HECHEME C F - 33
1e29_A_181e29   A     CACALCIUM ION F - 33
1e29_A_181e29   A     CACALCIUM ION V - 34
1e29_A_181e29   A     CACALCIUM ION D - 35
1e29_A_181e29   A     HECHEME C T - 36
1e29_A_181e29   A     CACALCIUM ION T - 36
1eu1_A_811eu1   A     CDCADMIUM ION D - 87
1eu1_A_811eu1   A     CDCADMIUM ION D - 91
1g8k_A_1311g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED V - 132
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE N - 158
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE V - 159
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE N - 160
1gs5_A_1561gs5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 160
1gs5_A_1561gs5   A     MGMAGNESIUM ION N - 160
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE A - 161
1gs5_A_1561gs5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 161
1gs5_A_1561gs5   A     MGMAGNESIUM ION A - 161
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE D - 162
1gs5_A_1561gs5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 162
1gs5_A_1561gs5   A     MGMAGNESIUM ION D - 162
1ile_*_1861ile   *     ZNZINC ION L - 188
1jce_A_1961jce   A     MSESELENOMETHIONINE R - 201
1jce_A_1961jce   A     MSESELENOMETHIONINE A - 203
1jce_A_1961jce   A     MSESELENOMETHIONINE K - 207
1oo0_A_471oo0   A     GOLGLYCEROL R - 48
1oo0_A_471oo0   A     GOLGLYCEROL K - 49
1q74_A_2251q74   A     PE42-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL A - 243
1ua4_A_321ua4   A     GLCGLUCOSE N - 32
1ua4_A_321ua4   A     GLCGLUCOSE I - 33
1ua4_A_321ua4   A     GLCGLUCOSE D - 34
2uag_A_1532uag   A     MGMAGNESIUM ION E - 157
2uag_A_1532uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE E - 157
2uag_A_1532uag   A     ADPADENOSINE-5'-DIPHOSPHATE E - 157
2uag_A_1532uag   A     KCXLYSINE NZ-CARBOXYLIC ACID L - 158
2uag_A_1532uag   A     KCXLYSINE NZ-CARBOXYLIC ACID S - 159
2uag_A_1532uag   A     MGMAGNESIUM ION S - 159
2uag_A_1532uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE S - 159
2uag_A_1532uag   A     KCXLYSINE NZ-CARBOXYLIC ACID S - 160
2uag_A_1532uag   A     KCXLYSINE NZ-CARBOXYLIC ACID F - 161
2uag_A_1532uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE F - 161
2uag_A_1532uag   A     UMAURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE Q - 162
2uag_A_1532uag   A     KCXLYSINE NZ-CARBOXYLIC ACID L - 163
7req_A_1137req   A     2CP2-CARBOXYPROPYL-COENZYME A L - 113
7req_A_1137req   A     2CP2-CARBOXYPROPYL-COENZYME A S - 114
7req_A_1137req   A     B12COBALAMIN A - 116
7req_A_1137req   A     B12COBALAMIN F - 117
7req_A_1137req   A     B12COBALAMIN D - 118
7req_A_1137req   A     B12COBALAMIN L - 119
7req_A_1137req   A     B12COBALAMIN H - 122
7req_A_1137req   A     2CP2-CARBOXYPROPYL-COENZYME A H - 122
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e29_A_181e29   A AC2CA BINDING SITE FOR CHAIN ZD - 35
1gs5_A_1561gs5   A NLGNLG BINDING SITE FOR CHAIN AA - 161

Clusters included in this Subclass
CLUSTER: EH.1.14
CLUSTER: EH.2.20