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Information on SUBCLASS 1.1.13
Subclass Accession number: 949
Subclass: 1.1.13 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 32

Average sequence ID (%) : 7.8 +/- 11.1
Average RMSD (Å) : 0.566 +/- 0.175

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XXXXX
(φψ)-conformation: bbpaa
Pattern: xxx[adenpst]xx[adegkqrst][acfilmv]x
Conservation:-1.000-0.847-0.5510.839-0.563-0.327-0.0712.119-0.599
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azz_A_1601azz   A161169PIMSNADCDEEE-HHHHHxxbxaaaaa
1e25_A_1801e25   A180187.WTSMKGAA.EE-HHHHH.bbxaaaaa
1efv_A_321efv   A3239.SLAPITLN.EE-THHHH.bxxaaaaa
1ez0_A_2591ez0   A260268TFIFPSAMREEE-HHHHHbbbxaaaaa
1fp3_A_2421fp3   A242250RHQNPGHALHEE-HHHHHaxbbaaaaa
1gxq_A_1731gxq   A173180.VYSREQLL.EE-HHHHH.xbxaaaaa
1h32_A_1031h32   A103111KVRTVEQMIEEE-HHHHHbxbbaaaaa
1h32_A_2111h32   A211219RLNAVHDRFEEE-HHHHHbxbxaaaaa
1h6t_A_691h6t   A6976.AVTQNELN.EE-HHHHH.xbbaaaaa
1hxh_A_2161hxh   A216223.AYMPERIA.EE-HHHHH.bbxaaaaa
1hzp_A_2051hzp   A205213VRLEGPAVFEEE-HHHHHxbbxaaaaa
1i0v_A_91i0v   A917NCYSSSDVSEEE-HHHHHxbbxaaaaa
1iqq_A_1321iqq   A132139.KRALLDIE.EE-HHHHH.xbxaaaaa
1j8f_A_2031j8f   A203210.EYPLSWMK.EE-HHHHH.xbxaaaaa
1jnr_A_5371jnr   A537544.KTNEKMLQ.EE-HHHHH.bbbaaaaa
1kcx_A_2741kcx   A276284GEPIAASLGEEEBHHHHHbbxbaaaaa
1kwg_A_2611kwg   A263271WDSYPLGFTEEE-HHHHHbbxbaaaaa
1l1l_A_5041l1l   A508516PVYDKRAIKEEE-HHHHHxbxxaaaaa
1mv8_A_3481mv8   A350358RIFDRNVEYEEE-HHHHHbbbbaaaaa
1mwv_A_3841mwv   A384391.TMLTTDLS.EE-HHHHH.bbxaaaaa
1nk4_A_4931nk4   A493501VKVDTKRLEEEE-HHHHHbxbxaaaaa
1nox_*_811nox   -8593LYADLEDALEEE-HHHHHxbbbaaaaa
1nsj_*_1891nsj   -189196.KKDHDSIK.EE-HHHHH.bxbaaaaa
1nth_A_2371nth   A237244.KIDLDAIS.EE-HHHHH.bbbaaaaa
1nvt_A_2481nvt   A248256KTINGLGMLEEE-THHHHxxbxaaaaa
1o5o_A_1611o5o   A161168.IAAPEGVE.EE-HHHHH.bbbaaaaa
1o6v_A_691o6v   A6976.TVSQTDLD.EE-HHHHH.xbbaaaaa
1p1m_A_2451p1m   A247255VSHNPASNLEEE-HHHHHxbxbaaaaa
1pii_*_4361pii   -436443.IKDARLLA.EE-HHHHH.bxxaaaaa
1qla_A_6031qla   A603611YIENPLSVKEE--HHHHHbxxbaaaaa
1vrt_A_3611vrt   A361368.HTNDVKQL.EE-HHHHH.bbbaaaaa
2dap_*_1642dap   -169177TLPSEDALEEEE-HHHHHxbxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h32_A_1031h32   A     HECHEME C V - 107
1h32_A_1031h32   A     HECHEME C M - 110
1h32_A_1031h32   A     HECHEME C I - 111
1h32_A_1031h32   A     HECHEME C C - 114
1h32_A_1031h32   A     HECHEME C R - 115
1h32_A_2111h32   A     CSSS-MERCAPTOCYSTEINE D - 217
1h32_A_2111h32   A     CSSS-MERCAPTOCYSTEINE R - 218
1h32_A_2111h32   A     EDO1,2-ETHANEDIOL R - 218
1h32_A_2111h32   A     HECHEME C R - 218
1h32_A_2111h32   A     CSSS-MERCAPTOCYSTEINE F - 219
1h32_A_2111h32   A     HECHEME C F - 219
1h32_A_2111h32   A     CSSS-MERCAPTOCYSTEINE R - 220
1hzp_A_2051hzp   A     DAOLAURIC ACID L - 207
1hzp_A_2051hzp   A     DAOLAURIC ACID E - 208
1hzp_A_2051hzp   A     DAOLAURIC ACID G - 209
1hzp_A_2051hzp   A     DAOLAURIC ACID P - 210
1hzp_A_2051hzp   A     DAOLAURIC ACID V - 212
1hzp_A_2051hzp   A     DAOLAURIC ACID F - 213
1hzp_A_2051hzp   A     GOLGLYCEROL D - 222
1hzp_A_2051hzp   A     GOLGLYCEROL R - 225
1hzp_A_2051hzp   A     GOLGLYCEROL R - 226
1hzp_A_2051hzp   A     GOLGLYCEROL D - 229
1i0v_A_91i0v   A     CACALCIUM ION C - 10
1i0v_A_91i0v   A     CACALCIUM ION Y - 11
1i0v_A_91i0v   A     CACALCIUM ION S - 12
1i0v_A_91i0v   A     CACALCIUM ION S - 14
1i0v_A_91i0v   A     CACALCIUM ION D - 15
1j8f_A_2031j8f   A     ZNZINC ION Y - 204
1jnr_A_5371jnr   A     GOLGLYCEROL R - 545
1jnr_A_5371jnr   A     GOLGLYCEROL L - 549
1kwg_A_2611kwg   A     MPD2-METHYL-2,4-PENTANEDIOL F - 270
1kwg_A_2611kwg   A     MPD2-METHYL-2,4-PENTANEDIOL L - 273
1mwv_A_3841mwv   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 386
1mwv_A_3841mwv   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 388
1nvt_A_2481nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 252
1nvt_A_2481nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 253
1nvt_A_2481nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 254
1nvt_A_2481nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 255
1nvt_A_2481nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 256
1nvt_A_2481nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 257
1nvt_A_2481nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 259
1p1m_A_2451p1m   A     NINICKEL (II) ION N - 250
2dap_*_1642dap   *     API2,6-DIAMINOPIMELIC ACID Q - 167
2dap_*_1642dap   *     API2,6-DIAMINOPIMELIC ACID T - 169
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h32_A_1031h32   A HA1HEC BINDING SITE FOR CHAIN AC - 114
1h32_A_2111h32   A EA1EDO BINDING SITE FOR CHAIN AR - 218
2dap_*_1642dap   * DAPDIAMINOPIMELATE BINDING SITE.T - 169

Clusters included in this Subclass
CLUSTER: EH.0.9
CLUSTER: EH.1.111
CLUSTER: EH.1.19
CLUSTER: EH.2.33