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PDB code:

Information on SUBCLASS 1.1.23

Subclass Accession number: 959 Subclass: 1.1.23 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 9 Average sequence ID (%) : 8.3 +/- 11.2 Average RMSD (Å) : 0.733 +/- 0.122 Consensus geometry d (Å): 9 delta (°): 0-45 theta (°): 0-45 rho (°): 180-225

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a1v_A_352	1a1v	A	353	360	AIPLEVIK	EE-THHHH	bbxaaaaa
1c7n_A_230	1c7n	A	233	240	FTAPSKTF	EE-SHHHH	xbbaaaaa
1mkm_A_58	1mkm	A	59	66	VPGYKLIE	EE-THHHH	bxxaaaaa
1nup_A_78	1nup	A	79	86	RVDPWESE	EE--HHHH	bxbaaaaa
1onr_A_174	1onr	A	176	183	SPFVGRIL	EEBSHHHH	bxxaaaaa
1qb7_A_42	1qb7	A	42	49	FADVSSIT	EE-THHHH	xxxaaaaa
1uhv_A_72	1uhv	A	76	83	FYNFTYID	EE--HHHH	bbxaaaaa
1xyz_A_528	1xyz	A	532	539	CVNYPFYN	EE-THHHH	xbxaaaaa
2mas_A_238	2mas	A	238	245	AAVHDPCA	EE--HHHH	xxbaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1c7n_A_230	1c7n	A	PLPPYRIDOXAL-5'-PHOSPHATE	A - 235
1c7n_A_230	1c7n	A	PLPPYRIDOXAL-5'-PHOSPHATE	S - 237
1c7n_A_230	1c7n	A	PLPPYRIDOXAL-5'-PHOSPHATE	K - 238
1mkm_A_58	1mkm	A	FMTFORMIC ACID	L - 64
1mkm_A_58	1mkm	A	FMTFORMIC ACID	I - 65
1mkm_A_58	1mkm	A	FMTFORMIC ACID	Y - 67
1mkm_A_58	1mkm	A	FMTFORMIC ACID	G - 68
1mkm_A_58	1mkm	A	FMTFORMIC ACID	S - 69
1mkm_A_58	1mkm	A	FMTFORMIC ACID	L - 72
1nup_A_78	1nup	A	NMNBETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE	E - 84
1qb7_A_42	1qb7	A	ADEADENINE	F - 42
1qb7_A_42	1qb7	A	CITCITRIC ACID	F - 42
1qb7_A_42	1qb7	A	ADEADENINE	A - 43
1qb7_A_42	1qb7	A	ADEADENINE	D - 44
2mas_A_238	2mas	A	PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL	H - 241
2mas_A_238	2mas	A	PIR2-(4-AMINO-PHENYL)-5-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL	D - 242
2mas_A_238	2mas	A	CACALCIUM ION	D - 242

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
2mas_A_238	2mas	A	S1DESCRIPTION NOT PROVIDED	H - 241
2mas_A_238	2mas	A	S1DESCRIPTION NOT PROVIDED	D - 242

Clusters included in this Subclass

CLUSTER: EH.3.69

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