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Information on SUBCLASS 1.1.28
Subclass Accession number: 964
Subclass: 1.1.28 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0015036 (>50 %)  
SCOP : 51904 (>75 %)  51905 (>75 %)  51943 (>75 %)  
 Number of loops: 6

Average sequence ID (%) : 10.0 +/- 13.8
Average RMSD (Å) : 0.483 +/- 0.172

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XhpXX
(φψ)-conformation: bppaa
Pattern: x[aipv][DENR][cdsw][AERT]x[AGLW][AKNRS]
Conservation:-1.246-0.1251.868-0.7070.512-0.378-0.6800.756
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bu8_A_991bu8   A103110CVDWRRGSEEE-HHHHxxbaaaaa
1d7y_A_2371d7y   A238245LANDALAREE--HHHHbpxaaaaa
1mo9_A_3151mo9   A315322QPRSAELAEE--HHHHbpxaaaaa
1o94_A_6441o94   A645652HSECTLWNEE--HHHHbxxaaaaa
1q1r_A_2481q1r   A249256IPNCELASEE--HHHHbxxaaaaa
3cla_*_323cla   -3845KIDITTLKEEE-HHHHbxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d7y_A_2371d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 240
1d7y_A_2371d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 243
1mo9_A_3151mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 317
1mo9_A_3151mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 320
1o94_A_6441o94   A     ADPADENOSINE-5'-DIPHOSPHATE R - 644
1o94_A_6441o94   A     ADPADENOSINE-5'-DIPHOSPHATE E - 647
1o94_A_6441o94   A     ADPADENOSINE-5'-DIPHOSPHATE L - 650
1q1r_A_2481q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 251
1q1r_A_2481q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 254

Clusters included in this Subclass
CLUSTER: EH.1.54
CLUSTER: EH.2.84