Logo
Information on SUBCLASS 1.1.38
Subclass Accession number: 974
Subclass: 1.1.38 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.1 (>75 %)  
GO : GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0046914 (>75 %)  
SCOP : 55873 (>75 %)  55874 (>75 %)  69804 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 8.3 +/- 11.9
Average RMSD (Å) : 0.475 +/- 0.275

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hhXhX
(φψ)-conformation: pbpaa
Pattern: x[CIPV][AFMY]x[APY]xx[FL][DRTY]xxx
Conservation:-0.573-0.2340.2750.0910.342-0.403-1.0822.427-0.9971.209-0.828-0.226
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gkz_A_2321gkz   A232243FPFIPMPLDYILEEE--HHHHHHHbxbxaaaaaaaa
1jm6_A_12291jm6   A12301241MVYVPSHLYHMLEEE-HHHHHHHHbxbxaaaaaaaa
1ptm_A_331ptm   A3647VCADATLLTNRAEEE-HHHHHHHHxxbxaaaaaaaa
1tif_*_561tif   -5869RIMDYGKFRFEQEEE-HHHHHHHHbxbxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gkz_A_2321gkz   A     MGMAGNESIUM ION E - 245
1gkz_A_2321gkz   A     ADPADENOSINE-5'-DIPHOSPHATE E - 245
1gkz_A_2321gkz   A     ADPADENOSINE-5'-DIPHOSPHATE L - 246
1gkz_A_2321gkz   A     MGMAGNESIUM ION K - 248
1gkz_A_2321gkz   A     MGMAGNESIUM ION N - 249
1gkz_A_2321gkz   A     ADPADENOSINE-5'-DIPHOSPHATE N - 249
1gkz_A_2321gkz   A     ADPADENOSINE-5'-DIPHOSPHATE A - 250
1gkz_A_2321gkz   A     ADPADENOSINE-5'-DIPHOSPHATE R - 252
1gkz_A_2321gkz   A     ADPADENOSINE-5'-DIPHOSPHATE A - 253
1jm6_A_12291jm6   A     MGMAGNESIUM ION E - 1243
1jm6_A_12291jm6   A     ADPADENOSINE-5'-DIPHOSPHATE E - 1243
1jm6_A_12291jm6   A     ADPADENOSINE-5'-DIPHOSPHATE L - 1244
1jm6_A_12291jm6   A     MGMAGNESIUM ION K - 1246
1jm6_A_12291jm6   A     MGMAGNESIUM ION N - 1247
1jm6_A_12291jm6   A     ADPADENOSINE-5'-DIPHOSPHATE N - 1247
1jm6_A_12291jm6   A     ADPADENOSINE-5'-DIPHOSPHATE A - 1248
1jm6_A_12291jm6   A     ADPADENOSINE-5'-DIPHOSPHATE R - 1250
1jm6_A_12291jm6   A     ADPADENOSINE-5'-DIPHOSPHATE A - 1251
1ptm_A_331ptm   A     MSESELENOMETHIONINE T - 44
1ptm_A_331ptm   A     MSESELENOMETHIONINE N - 45
1ptm_A_331ptm   A     MSESELENOMETHIONINE R - 46
1ptm_A_331ptm   A     MSESELENOMETHIONINE A - 47
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gkz_A_2321gkz   A MGMG BINDING SITE FOR CHAIN AN - 249

Clusters included in this Subclass
CLUSTER: EH.1.94