| Accession | HsInv0129 | Region of the inversion | chr1:141521340-141868210 |
| Status | Validated | Prediction type | Simple |
| Estimated Inversion Size | 333,251 bp | Supporting predictions | 1 |
| Inverted allele frequency | ND | Mechanism of origin | NAHR between inverted repeats |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr1:141521340-141534960 |
| Ancestral orientation | NA | Breakpoint 2 | chr1:141854590-141868210 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Paired-end mapping of 3-kb fragments in an African and in a putatively European individual with some predictions validated by PCR, fiber-FISH or comparison with Celera assembly | ||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||
| Name | |||||||||
| Breakpoint 1 | chr1:141528150-141528150 | Breakpoint 2 | chr1:141861400-141861400 | ||||||
| Individuals |
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+ Validation and genotyping
| Description | Paired-end mapping of 3-kb fragments in an African and in a putatively European individual with some predictions validated by PCR, fiber-FISH or comparison with Celera assembly | ||
| Method | Polymerase chain reaction (PCR) |
| Status | Validated |
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr1:141521340-141534960 | Breakpoint 2 | chr1:141854590-141868210 | |||||||||||||
| Definition method | Default informatic definition | |||||||||||||||
| Mechanism of origin |
NAHR between inverted repeats
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| Flexibility | 11.23 | GC content | 0.34 | Stability | 1.71 |
| Position SD1 | Size (bp) | Position SD2 | Size (bp) | Identity | Relative orientation |
| chr1:141483791-141602271 | 118,481 | chr1:141792325-141909284 | 116,960 | 0.969 | Inverted |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
- 2015-02-23 10:14:59
| Breakpoint 1 | chr1:141521340-141534960 | Breakpoint 2 | chr1:141854590-141868210 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
