BLASTP 2.1.3 [Apr-1-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= tr|Q9HIK0 Cell-cycle regulation histidine triad (HIT) related
protein - Thermoplasma acidophilum.
(160 letters)

Database: /disc9/DB/blast/pdb
30,673 sequences; 9,163,132 total letters

Searching..................................................done


Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:

/seq/databases/pdb/scratch/pdb1ems.ent Chain A 162 2e-40
/seq/databases/pdb/scratch/pdb1ems.ent Chain B 156 9e-39
/seq/databases/pdb/scratch/pdb2fit.ent Chain 155 1e-38
/seq/databases/pdb/scratch/pdb1av5.ent Chain A 153 6e-38
/seq/databases/pdb/scratch/pdb1av5.ent Chain B 153 6e-38
/seq/databases/pdb/scratch/pdb1kpa.ent Chain A 153 6e-38
/seq/databases/pdb/scratch/pdb1kpa.ent Chain B 153 6e-38
/seq/databases/pdb/scratch/pdb1kpb.ent Chain A 153 6e-38
/seq/databases/pdb/scratch/pdb1kpb.ent Chain A 153 6e-38
/seq/databases/pdb/scratch/pdb1kpb.ent Chain B 153 6e-38
/seq/databases/pdb/scratch/pdb1kpe.ent Chain A 153 6e-38
/seq/databases/pdb/scratch/pdb1kpe.ent Chain B 153 6e-38
/seq/databases/pdb/scratch/pdb1kpc.ent Chain D 152 1e-37
/seq/databases/pdb/scratch/pdb1kpc.ent Chain A 152 1e-37
/seq/databases/pdb/scratch/pdb1kpc.ent Chain B 152 1e-37
/seq/databases/pdb/scratch/pdb1kpc.ent Chain C 152 1e-37
/seq/databases/pdb/scratch/pdb1kpf.ent Chain 152 1e-37
/seq/databases/pdb/scratch/pdb1fhi.ent Chain 150 3e-37
/seq/databases/pdb/scratch/pdb1fit.ent Chain 150 5e-37
/seq/databases/pdb/scratch/pdb5fit.ent Chain 150 5e-37
/seq/databases/pdb/scratch/pdb3fit.ent Chain A 150 5e-37
/seq/databases/pdb/scratch/pdb6fit.ent Chain 149 7e-37
/seq/databases/pdb/scratch/pdb3rhn.ent Chain 147 3e-36
/seq/databases/pdb/scratch/pdb4rhn.ent Chain 147 3e-36
/seq/databases/pdb/scratch/pdb5rhn.ent Chain 147 3e-36
/seq/databases/pdb/scratch/pdb6rhn.ent Chain 147 3e-36
/seq/databases/pdb/scratch/pdb4fit.ent Chain 147 5e-36
/seq/databases/pdb/scratch/pdb2fhi.ent Chain 144 2e-35
/seq/databases/pdb/scratch/pdb1gup.ent Chain A 82 3e-16
/seq/databases/pdb/scratch/pdb1guq.ent Chain A 82 3e-16
/seq/databases/pdb/scratch/pdb1hxq.ent Chain A 82 3e-16
/seq/databases/pdb/scratch/pdb1gup.ent Chain B 81 3e-16
/seq/databases/pdb/scratch/pdb1gup.ent Chain C 81 3e-16
/seq/databases/pdb/scratch/pdb1gup.ent Chain D 81 3e-16
/seq/databases/pdb/scratch/pdb1guq.ent Chain B 81 3e-16
/seq/databases/pdb/scratch/pdb1guq.ent Chain C 81 3e-16
/seq/databases/pdb/scratch/pdb1guq.ent Chain D 81 3e-16
/seq/databases/pdb/scratch/pdb1hxp.ent Chain A 81 3e-16
/seq/databases/pdb/scratch/pdb1hxp.ent Chain B 81 3e-16
/seq/databases/pdb/scratch/pdb1hxq.ent Chain B 81 3e-16

Sequences not found previously or not previously below threshold:


CONVERGED!
>/seq/databases/pdb/scratch/pdb1ems.ent Chain A
Length = 412

Score = 162 bits (410), Expect = 2e-40
Identities = 30/112 (26%), Positives = 52/112 (45%), Gaps = 8/112 (7%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
A I YS + F++ KP+ GH L+ P++ + + D + + + +E+
Sbjct: 299 ADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEK 358

Query: 91 ATGSDGTFIAINN--KVSQSVPHVHVHIVPRKHKDGLKGFFWPRQSYSEGEE 140
T I + + Q+VPHVH+HI+PR+ D +PR + EE
Sbjct: 359 HHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGD------FPRSNEQMAEE 404


>/seq/databases/pdb/scratch/pdb1ems.ent Chain B
Length = 410

Score = 156 bits (395), Expect = 9e-39
Identities = 29/112 (25%), Positives = 50/112 (43%), Gaps = 10/112 (8%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
A I YS + F++ KP+ GH L+ P++ + + D + + + +E+
Sbjct: 299 ADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEK 358

Query: 91 ATGSDGTFIAINN--KVSQSVPHVHVHIVPRKHKDGLKGFFWPRQSYSEGEE 140
T I + + Q+VPHVH+HI+PR+ D R + EE
Sbjct: 359 HHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGD--------RSNEQMAEE 402


>/seq/databases/pdb/scratch/pdb2fit.ent Chain
Length = 128

Score = 155 bits (393), Expect = 1e-38
Identities = 28/104 (26%), Positives = 48/104 (45%), Gaps = 5/104 (4%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
S + E A ++ KP+ GH L+ P + + + ++ + +T + VE+
Sbjct: 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEK 70

Query: 91 A-TGSDGTFIAINNKVSQSVPHVHVHIVPRKHKDGLKGFFWPRQ 133
G+ TF + Q+V HVHVH++PRK D F +P
Sbjct: 71 HFHGTSLTFSQDGPEAGQTVKHVHVHVLPRKAGD----FHFPAS 110


>/seq/databases/pdb/scratch/pdb1av5.ent Chain A
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1av5.ent Chain B
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1kpa.ent Chain A
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1kpa.ent Chain B
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1kpb.ent Chain A
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1kpb.ent Chain A
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1kpb.ent Chain B
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1kpe.ent Chain A
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1kpe.ent Chain B
Length = 113

Score = 153 bits (388), Expect = 6e-38
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 6 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 64

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 65 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 111


>/seq/databases/pdb/scratch/pdb1kpc.ent Chain D
Length = 109

Score = 152 bits (385), Expect = 1e-37
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 2 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 60

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 61 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 107


>/seq/databases/pdb/scratch/pdb1kpc.ent Chain A
Length = 111

Score = 152 bits (384), Expect = 1e-37
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 4 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 62

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 63 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 109


>/seq/databases/pdb/scratch/pdb1kpc.ent Chain B
Length = 111

Score = 152 bits (384), Expect = 1e-37
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 4 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 62

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 63 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 109


>/seq/databases/pdb/scratch/pdb1kpc.ent Chain C
Length = 111

Score = 152 bits (384), Expect = 1e-37
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 4 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 62

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 63 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 109


>/seq/databases/pdb/scratch/pdb1kpf.ent Chain
Length = 111

Score = 152 bits (384), Expect = 1e-37
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I +D S ++ +
Sbjct: 4 FGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDES-LLGHL 62

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + + N+ QSV HVH+H++ G + WP
Sbjct: 63 MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMHWP 109


>/seq/databases/pdb/scratch/pdb1fhi.ent Chain
Length = 125

Score = 150 bits (381), Expect = 3e-37
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
S + E A ++ KP+ GH L+ P + + + ++ + +T + VE+
Sbjct: 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEK 70

Query: 91 A-TGSDGTFIA-INNKVSQSVPHVHVHIVPRKHKDGLK 126
G+ TF + Q+V HVHVH++PRK D +
Sbjct: 71 HFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDSWR 108


>/seq/databases/pdb/scratch/pdb1fit.ent Chain
Length = 124

Score = 150 bits (380), Expect = 5e-37
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
S + E A ++ KP+ GH L+ P + + + ++ + +T + VE+
Sbjct: 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEK 70

Query: 91 A-TGSDGTFIAINNKVSQSVPHVHVHIVPRKHKD 123
G+ TF + Q+V HVHVH++PRK D
Sbjct: 71 HFHGTSLTFSQDGPEAGQTVKHVHVHVLPRKAGD 104


>/seq/databases/pdb/scratch/pdb5fit.ent Chain
Length = 124

Score = 150 bits (380), Expect = 5e-37
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
S + E A ++ KP+ GH L+ P + + + ++ + +T + VE+
Sbjct: 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEK 70

Query: 91 A-TGSDGTFIAINNKVSQSVPHVHVHIVPRKHKD 123
G+ TF + Q+V HVHVH++PRK D
Sbjct: 71 HFHGTSLTFSQDGPEAGQTVKHVHVHVLPRKAGD 104


>/seq/databases/pdb/scratch/pdb3fit.ent Chain A
Length = 122

Score = 150 bits (380), Expect = 5e-37
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
S + E A ++ KP+ GH L+ P + + + ++ + +T + VE+
Sbjct: 12 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEK 71

Query: 91 A-TGSDGTFIAINNKVSQSVPHVHVHIVPRKHKD 123
G+ TF + Q+V HVHVH++PRK D
Sbjct: 72 HFHGTSLTFSQDGPEAGQTVKHVHVHVLPRKAGD 105


>/seq/databases/pdb/scratch/pdb6fit.ent Chain
Length = 125

Score = 149 bits (378), Expect = 7e-37
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
S + E A ++ KP+ GH L+ P + + + ++ + +T + VE+
Sbjct: 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEK 70

Query: 91 A-TGSDGTFIA-INNKVSQSVPHVHVHIVPRKHKDGLK 126
G+ TF + Q+V HVHVH++PRK D +
Sbjct: 71 HFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFWR 108


>/seq/databases/pdb/scratch/pdb3rhn.ent Chain
Length = 115

Score = 147 bits (373), Expect = 3e-36
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I A +D S ++ +
Sbjct: 8 FGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADES-LLGHL 66

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + N+ QSV HVH+H++ G + WP
Sbjct: 67 MIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMNWP 113


>/seq/databases/pdb/scratch/pdb4rhn.ent Chain
Length = 115

Score = 147 bits (373), Expect = 3e-36
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I A +D S ++ +
Sbjct: 8 FGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADES-LLGHL 66

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + N+ QSV HVH+H++ G + WP
Sbjct: 67 MIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMNWP 113


>/seq/databases/pdb/scratch/pdb5rhn.ent Chain
Length = 115

Score = 147 bits (373), Expect = 3e-36
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I A +D S ++ +
Sbjct: 8 FGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADES-LLGHL 66

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + N+ QSV HVH+H++ G + WP
Sbjct: 67 MIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMNWP 113


>/seq/databases/pdb/scratch/pdb6rhn.ent Chain
Length = 115

Score = 147 bits (373), Expect = 3e-36
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 22 FCDIISGKTASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTV 81
F II + ++I++ D+ +AF D P H L++P+KH + I A +D S ++ +
Sbjct: 8 FGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADES-LLGHL 66

Query: 82 TIISMAVERATGSDGTFIAINNK---VSQSVPHVHVHIVPRKHKDGLKGFFWP 131
I+ G + + N+ QSV HVH+H++ G + WP
Sbjct: 67 MIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVL------GGRQMNWP 113


>/seq/databases/pdb/scratch/pdb4fit.ent Chain
Length = 126

Score = 147 bits (371), Expect = 5e-36
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
S + E A ++ KP+ GH L+ P + + + ++ + +T + VE+
Sbjct: 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEK 70

Query: 91 A-TGSDGTFIA-INNKVSQSVPHVHVHIVPRKHKD 123
G+ TF + Q+V HVHVH++PRK D
Sbjct: 71 HFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGD 105


>/seq/databases/pdb/scratch/pdb2fhi.ent Chain
Length = 124

Score = 144 bits (365), Expect = 2e-35
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 31 ASEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTIISMAVER 90
S + E A ++ KP+ GH L+ P + + + ++ + +T + VE+
Sbjct: 11 PSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEK 70

Query: 91 A-TGSDGTFIA-INNKVSQSVPHVHVHIVPRKHKD 123
G+ TF + Q+V HV+VH++PRK D
Sbjct: 71 HFHGTSLTFSMQDGPEAGQTVKHVNVHVLPRKAGD 105


>/seq/databases/pdb/scratch/pdb1gup.ent Chain A
Length = 347

Score = 81.5 bits (201), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 209 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 260


>/seq/databases/pdb/scratch/pdb1guq.ent Chain A
Length = 347

Score = 81.5 bits (201), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 209 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 260


>/seq/databases/pdb/scratch/pdb1hxq.ent Chain A
Length = 340

Score = 81.5 bits (201), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 202 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 253


>/seq/databases/pdb/scratch/pdb1gup.ent Chain B
Length = 344

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 209 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 260


>/seq/databases/pdb/scratch/pdb1gup.ent Chain C
Length = 344

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 209 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 260


>/seq/databases/pdb/scratch/pdb1gup.ent Chain D
Length = 344

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 209 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 260


>/seq/databases/pdb/scratch/pdb1guq.ent Chain B
Length = 344

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 209 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 260


>/seq/databases/pdb/scratch/pdb1guq.ent Chain C
Length = 344

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 209 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 260


>/seq/databases/pdb/scratch/pdb1guq.ent Chain D
Length = 344

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 209 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 260


>/seq/databases/pdb/scratch/pdb1hxp.ent Chain A
Length = 340

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 202 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 253


>/seq/databases/pdb/scratch/pdb1hxp.ent Chain B
Length = 329

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 193 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 244


>/seq/databases/pdb/scratch/pdb1hxq.ent Chain B
Length = 332

Score = 81.1 bits (200), Expect = 3e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 32 SEIVYSDENFVAFLDYKPLFKGHTLLVPRKHFADIYAMDDLTLSKMMKTVTI 83
S V E+++A + Y + TLL+P+ H I + D S + +
Sbjct: 196 SRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKK 247


Database: /disc9/DB/blast/pdb
Posted date: Jan 23, 2002 12:37 PM
Number of letters in database: 9,163,132
Number of sequences in database: 30,673

Lambda K H
0.316 0.158 0.457

Lambda K H
0.267 0.0484 0.140


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10066775
Number of Sequences: 30673
Number of extensions: 469157
Number of successful extensions: 999
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 730
Number of HSP's gapped (non-prelim): 121
length of query: 160
length of database: 9,163,132
effective HSP length: 45
effective length of query: 115
effective length of database: 7,782,847
effective search space: 895027405
effective search space used: 895027405
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 58 (26.7 bits)