# STOCKHOLM 1.0
#=GF AU    HMMER 2.2g

#=GS sp|P11018|ISP1_BACSU AC    Major intracellular serine protease (EC 3.4.21.-) (ISP-1) - Bacillus subtilis.

sp|P11018|ISP1_BACSU        mngeirlipyvtneqimdVNELPEGIKVIKAPEMWAKGVKGKNIKVAVLD
1a2q                        ..................AQSVPYGVSQIKAPALHSQGYCGSNVKVAVID
1sbh                        ..................AQSVPYGVSQIKAPALHSQGYTGSNVKVAVID
1sca                        ..................AQTVPYGIPLIKADKVQAQGFKGANVKVAVLD
3vsb                        ..................AQTVPYGIPLIKADKVQAQGFKGANVKVAVLD
#=GC RF                     ..................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

sp|P11018|ISP1_BACSU        TGCDTSHPDLKnqIIGGKNFTdddGGKEDAISDYNGHGTHVAGTIAANDS
1a2q                        SGIDSSHPDLK..VAGGASMV...PSETNPFQDNNSHGTHVAGTVAALNN
1sbh                        SGIDSSHPDLK..VAGGASFV...PSETNPFQDNNSHGTHVAGTVAALDN
1sca                        TGIQASHPDLN..VVGGASFV...AG-EAYNTDGNGHGTHVAGTVAALDN
3vsb                        TGIQASHPDLN..VVGGASFV...AG-EAYNTDGNGHGTHVAGTVAALDN
#=GC RF                     xxxxxxxxxxx..xxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxx

sp|P11018|ISP1_BACSU        NGGIAGVAPEASLLIVKVLGGEnGSGQYEWIINGINYAVEQKVDIISMSL
1a2q                        SIGVLGVAPCASLYAVKVLGAD.GSGQYSWIINGIEWAIANNMDVINMSL
1sbh                        SIGVLGVAPSASLYAVKVLGAD.GSGQYSWIINGIEWAIANNMDVINMSL
1sca                        TTGVLGVAPSVSLYAVKVLNSS.GSGSYSGIVSGIEWATTNGMDVINMSL
3vsb                        TTGVLGVAPSVSLYAVKVLNSS.GSGSYSGIVSGIEWATTNGMDVINMSL
#=GC RF                     xxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxx

sp|P11018|ISP1_BACSU        GGPSDVPELKEAVKNAVKNGVLVVCAAGNEGDGDErTEELSYPAAYNEVI
1a2q                        GGPSGSAALKAAVDKAVASGVVVVAAAGNEGTSGS.SSTVGYPAKYPSVI
1sbh                        GGPSGSAALKAAVDKAVASGVVVVAAAGNEGTSGS.SSTVGYPAKYPSVI
1sca                        GGASGSTAMKQAVDNAYARGVVVVAAAGNSGNSGS.TNTIGYPAKYDSVI
3vsb                        GGASGSTAMKQAVDNAYARGVVVVAAAGNSGNSGS.TNTIGYPAKYDSVI
#=GC RF                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxx

sp|P11018|ISP1_BACSU        AVGSVSVARELSEFSNANKEIDLVAPGENILSTLPNKKYGKLTGTSMAAP
1a2q                        AVGAVDSSNQRASFSSVGPELDVMAPGVSIQSTLPGNKYGAYSG-TMASP
1sbh                        AVGAVDSSNQRASFSSVGPELDVMAPGVSICSTLPGNKYGAYSGTSMASP
1sca                        AVGAVDSNSNRASFSSVGAELEVMAPGAGVYSTYPTNTYATLNGTSMASP
3vsb                        AVGAVDSNSNRASFSSVGAELEVMAPGAGVYSTYPTNTYATLNG-TMASP
#=GC RF                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

sp|P11018|ISP1_BACSU        HVSGALALIKSYEEEsfqrkLSESEVFAQLIRRTLPL..DIAkTLAGNGF
1a2q                        HVAGAAALILSKHPN.....WTNTQVRSSLENTTTKLlgGDS.FYYGKGL
1sbh                        HVAGAAALILSKHPN.....WTNTQVRSSLENTTTYL..GDS.FYYGKGL
1sca                        HVAGAAALILSKHPN.....LSASQVRNRLSSTATYL..GSS.FYYGKGL
3vsb                        HVAGAAALILSKHPN.....LSASQVRNRLSSTATYL..GSS.FYYGKGL
#=GC RF                     xxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxx..xxx.xxxxxxx

sp|P11018|ISP1_BACSU        LYLTAPDElaekaeqshlltl
1a2q                        INVQAAAQ.............
1sbh                        INVQAAAQ.............
1sca                        INVEAAAQ.............
3vsb                        INVEAAAQ.............
#=GC RF                     xxxxxxxx.............
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