read pdb model1.clu.cut obj1 analyse energy obj1 plot winsize obj1 50 plot draw * obj1 1 plot color comb obj1 cyan color surf obj1 magenta plot read pdb model2.clu.cut obj2 analyse energy obj2 plot color * obj2 red winsize * 50 plot read pdb model1.hmm.cut obj3 analyse energy obj3 plot color * obj3 blue winsize * 50 plot read pdb model2.hmm.cut obj4 analyse energy obj4 plot color * obj4 green winsize * 50 plot draw * * 0 draw pair * 1 plot export plot myplot