# STOCKHOLM 1.0
#=GF AU    HMMER 2.2g

#=GS gi|3334468|sp|P11018|ISP1_BACSU AC    Major intracellular serine protease (ISP-1)

P11018                                 mngeirlipyvtneqiMDVNELPEGIKVIK--------APEMWAKGVKGK
1aqnSEQ                                ................--AQSVPYGVSQIK--------APALHSQGYCGS
1pekSEQE                               ................AAQTNAPWGLAR-ISSTSPGTSTYYY--DESAGQ
1av7SEQ                                ................--AQTVPYGIPLIK--------ADKVQAQGFKGA
1c9jSEQA                               ................--AQSVPWGISRVQ--------APAAHNRGLTGS
#=GCRF                                 ................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

P11018                                 NIKVAVLDTGCDTSHPDLKNQIIGGKNFTdddGGKEDAISDYNGHGTHVA
1aqnSEQ                                NVKVAVIDSGIDSSHPD--LKVAGGASFV...PSETNPFQDNNSHGTHVA
1pekSEQE                               GSCVYVIDTGIEASHPEFEGRAQMVKTY-...--YYS-SRDGNGHGTHCA
1av7SEQ                                NVKVAVLDTGIQASHPD--LNVVGGASFV...AG-EAYNTDGNGHGTHVA
1c9jSEQA                               GVRVAVLDTGI-STHPD--LNIRGGASFV...PGEPS-TQDGNGHGTHVA
#=GC RF                                xxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxx

P11018                                 GTIAANDSNGGIAGVAPEASLLIVKVLgGENGSGQYEWIINGINYAVE--
1aqnSEQ                                GTVAALNNSIGVLGVAPCASLYAVKVL.GADGSGQYSWIINGIEWAIA--
1pekSEQE                               GTVGS-----RTYGVVKKTQLFGVKVL.DDNGSGQYSTIIAGMDFVASDK
1av7SEQ                                GTVAALDNTTGVLGVAPSVSLYAVKVL.NSSGSGSYSGIVSGIEWATT--
1c9jSEQA                               GTIAALNNSIGVLGVAPSAELYAVKVL.GASGSGSYSSIAQGLEWAGN--
#=GC RF                                xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxx

P11018                                 ---Q--KVDIISMSLGGPSDVPELKEAVKNAVKNGVLVVCAAGNEG-DGD
1aqnSEQ                                N--N---MDVINMSLGGPSGSAALKAAVDKAVASGVVVVAAAGNEGTSGS
1pekSEQE                               NNRNCPKGVVASLSLGG-GYSSSVNSAAARLQSSGVMVAVAAGNNN----
1av7SEQ                                N--G---MDVINMSLGGASGSTAMKQAVDNAYARGVVVVAAAGNSGNSGS
1c9jSEQA                               N--G---MHVASLSLGSPSPSATLEQAVNSATSRGVLVVAASGNSG----
#=GC RF                                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

P11018                                 ERTEELSYPAAYNEVIAVGSVSVARELSEFSNANKEIDLVAPGENILSTL
1aqnSEQ                                SST--VGYPAKYPSVIAVGAVDSSNQRASFSSVGPELDVMAPGVSICSTL
1pekSEQE                               -ADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTW
1av7SEQ                                TNT--IGYPAKYDSVIAVGAVDSNSNRASFSSVGAELEVMAPGAGVYSTY
1c9jSEQA                               -AG-SISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGVNVQSTY
#=GC RF                                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

P11018                                 PNKKYGKLTGTSMAAPHVSGALALIKSYEEEsfqrKLSESEVFAQLIRRT
1aqnSEQ                                PGNKYGAKSGTSMASPHVAGAAALILSKHPN....-WTNTQVRSSLENTT
1pekSEQE                               IGGSTRSISGTSMATPHVAGLAAYLMT--LG....KTTAASACRYIADTA
1av7SEQ                                PTNTYATLNG-TMASPHVAGAAALILSKHPN....-LSASQVRNRLSSTA
1c9jSEQA                               PGSTYASLNGTSMATPHVAGAAALVKQKNPS....-WSNVQIRNHLKNTA
#=GC RF                                xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx....xxxxxxxxxxxxxxx

P11018                                 L--PL-DIAKTLAGNGFLYLTAPDElaekaeqshlltl
1aqnSEQ                                T--KLLGGDSFYYGKGLINVQAAAQ.............
1pekSEQE                               NKGDLSNIPFG-TVNLLAYN--NYQa............
1av7SEQ                                T--YL--GSSFYYGKGLINVEAAAQ.............
1c9jSEQA                               T--SL--GSTNLYGSGLVNAEAAAR.............
#=GC RF                                xxxxxxxxxxxxxxxxxxxxxxxxx.............
//