BLASTP 2.1.3 [Apr-1-2001] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= AF1453_1 (539 letters) Database: /disc9/DB/blast/pdb 30,673 sequences; 9,163,132 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value /seq/databases/pdb/scratch/pdb1f4l.ent Chain A 588 e-168 /seq/databases/pdb/scratch/pdb1qqt.ent Chain A 587 e-168 /seq/databases/pdb/scratch/pdb1a8h.ent Chain 516 e-146 /seq/databases/pdb/scratch/pdb1ffy.ent Chain A 148 8e-36 /seq/databases/pdb/scratch/pdb1qu2.ent Chain A 148 8e-36 /seq/databases/pdb/scratch/pdb1qu3.ent Chain A 147 1e-35 /seq/databases/pdb/scratch/pdb1gax.ent Chain A 129 4e-30 /seq/databases/pdb/scratch/pdb1gax.ent Chain B 129 4e-30 /seq/databases/pdb/scratch/pdb1ile.ent Chain 124 2e-28 /seq/databases/pdb/scratch/pdb1jzq.ent Chain A 124 2e-28 /seq/databases/pdb/scratch/pdb1jzs.ent Chain A 124 2e-28 /seq/databases/pdb/scratch/pdb1med.ent Chain 41 0.001 /seq/databases/pdb/scratch/pdb1iq0.ent Chain A 37 0.019 /seq/databases/pdb/scratch/pdb1ir4.ent Chain A 37 0.019 /seq/databases/pdb/scratch/pdb1jil.ent Chain A 37 0.038 /seq/databases/pdb/scratch/pdb1jii.ent Chain A 37 0.038 /seq/databases/pdb/scratch/pdb1jij.ent Chain A 37 0.038 /seq/databases/pdb/scratch/pdb1jik.ent Chain A 37 0.038 /seq/databases/pdb/scratch/pdb1qrt.ent Chain A 36 0.051 /seq/databases/pdb/scratch/pdb1qru.ent Chain A 36 0.051 /seq/databases/pdb/scratch/pdb1qrs.ent Chain A 36 0.053 /seq/databases/pdb/scratch/pdb1euq.ent Chain A 36 0.053 /seq/databases/pdb/scratch/pdb1euy.ent Chain A 36 0.053 /seq/databases/pdb/scratch/pdb1exd.ent Chain A 36 0.053 /seq/databases/pdb/scratch/pdb1gts.ent Chain A 36 0.053 /seq/databases/pdb/scratch/pdb1qtq.ent Chain A 36 0.053 /seq/databases/pdb/scratch/pdb1gsg.ent Chain P 36 0.054 /seq/databases/pdb/scratch/pdb1mea.ent Chain 35 0.12 /seq/databases/pdb/scratch/pdb1f7u.ent Chain A 31 2.1 /seq/databases/pdb/scratch/pdb1f7v.ent Chain A 31 2.1 /seq/databases/pdb/scratch/pdb1bs2.ent Chain A 31 2.2 >/seq/databases/pdb/scratch/pdb1f4l.ent Chain A Length = 545 Score = 588 bits (1517), Expect = e-168 Identities = 177/544 (32%), Positives = 278/544 (50%), Gaps = 16/544 (2%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 LVTC LPYANG H+GH+ ++ ADV+VRY RM G EV F+C D HGTPI++ A+Q G+ Sbjct: 5 LVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGI 64 Query: 63 SPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLA 122 +P++++ + F NI +D Y T S+ + + I RL E G++ + I Sbjct: 65 TPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQL 124 Query: 123 YCPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEFRS 181 Y P+ FLPDR+V+G CP C + + GD C+ CG P E+ EP+ + G+ R Sbjct: 125 YDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEV-CGATYSPTELIEPKSVVSGATPVMRD 183 Query: 182 QRHYFFKLTEFQDFLEDYLSKLKGTENALNYARNWVK-NLRDWCITRNLE-WGVRFPGEP 239 H+FF L F + L+ + E N + W + L+ W I+R+ +G P P Sbjct: 184 SEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAP 243 Query: 240 NLVVYVWVDAPIGYISFTEKACEEKGC--DWRKIW-IDGDAEIIHFIGLDIVYHHCIFWP 296 YVW+DAPIGY+ + C+++G + + W D AE+ HFIG DIVY H +FWP Sbjct: 244 GKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWP 303 Query: 297 AMLKGADYALPSAVVASGMVKVEGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYI-VNYT 355 AML+G+++ PS + G V V G SKSRG +++ + D LRYY + Sbjct: 304 AMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRG--TFIKASTWLNHFDADSLRYYYTAKLS 361 Query: 356 SHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEV-RMEGVDEEVLEKIRET 414 S D++ + E F ++VN +++ + N R F K F V E D ++ + + Sbjct: 362 SRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYKTFTDA 421 Query: 415 EQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKTD-KEAARRAVASC-LQLA 472 + I A E EF A M LA N Y PW + K + ++A +A+ S + L Sbjct: 422 AEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLF 481 Query: 473 KALIIFAYPVMPESMERMAKAIGLDLENVRLSDAYKVDEVMKLSKPEVPFAKVEDEVIEK 532 + L+ + PV+P+ ER + +L + K++ + + +++ +E Sbjct: 482 RVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLL---GHKVNPFKALYNRIDMRQVEA 538 Query: 533 LQKV 536 L + Sbjct: 539 LVEA 542 >/seq/databases/pdb/scratch/pdb1qqt.ent Chain A Length = 546 Score = 587 bits (1514), Expect = e-168 Identities = 177/544 (32%), Positives = 276/544 (50%), Gaps = 16/544 (2%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 LVTC LPYANG H+GH+ ++ ADV+VRY RM G EV F+C D HGTPI++ A+Q G+ Sbjct: 6 LVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGI 65 Query: 63 SPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLA 122 +P++++ + F NI +D Y T S+ + + I RL E G++ + I Sbjct: 66 TPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQL 125 Query: 123 YCPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEFRS 181 Y P+ FLPDR+V+G CP C + + GD C+ CG P E+ EP+ + G+ R Sbjct: 126 YDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEV-CGATYSPTELIEPKSVVSGATPVMRD 184 Query: 182 QRHYFFKLTEFQDFLEDYLSKLKGTENALNYARNWVK-NLRDWCITRNLE-WGVRFPGEP 239 H+FF L F + L+ + E N + W + L+ W I+R+ +G P P Sbjct: 185 SEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAP 244 Query: 240 NLVVYVWVDAPIGYISFTEKACEEKGC--DWRKIW-IDGDAEIIHFIGLDIVYHHCIFWP 296 YVW+DAPIGY+ + C+++G + + W D AE+ HFIG DIVY H +FWP Sbjct: 245 GKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWP 304 Query: 297 AMLKGADYALPSAVVASGMVKVEGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYI-VNYT 355 AML+G+++ PS + G V V G SKSRG +++ + D LRYY + Sbjct: 305 AMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRG--TFIKASTWLNHFDADSLRYYYTAKLS 362 Query: 356 SHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEV-RMEGVDEEVLEKIRET 414 S D++ + E F ++VN +++ + N R F K F V E D + + + Sbjct: 363 SRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPALYKTFTDA 422 Query: 415 EQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKT-DKEAARRAVASC-LQLA 472 + I A E EF A M LA N Y PW + K ++A +A+ S + L Sbjct: 423 AEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQAGRDADLQAICSMGINLF 482 Query: 473 KALIIFAYPVMPESMERMAKAIGLDLENVRLSDAYKVDEVMKLSKPEVPFAKVEDEVIEK 532 + L+ + PV+P+ ER + +L + K++ + + +++ +E Sbjct: 483 RVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLL---GHKVNPFKALYNRIDMRQVEA 539 Query: 533 LQKV 536 L + Sbjct: 540 LVEA 543 >/seq/databases/pdb/scratch/pdb1a8h.ent Chain Length = 500 Score = 516 bits (1331), Expect = e-146 Identities = 144/533 (27%), Positives = 231/533 (43%), Gaps = 50/533 (9%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 VT + Y N + H+GH T V AD R+ R+ G F+ G+D HG + A+ G Sbjct: 6 YVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGE 65 Query: 63 SPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLA 122 PK VD F + +D L I +D + RT + H ++K++ E G +Y E + Sbjct: 66 DPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEGL 125 Query: 123 YCPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGEIKEPRCKICGSKAEFRSQ 182 YC C+RF ++ E+ E C I G E R + Sbjct: 126 YCVSCERFYTEK-----------------------------ELVEGLCPIHGRPVERRKE 156 Query: 183 RHYFFKLTEFQDFLEDYLSKLKGTENALNYARNWV----KNLRDWCITR---NLEWGVRF 235 +YFF++ +++ +L++Y+ + Y + + + D I+R + WG+ Sbjct: 157 GNYFFRMEKYRPWLQEYIQENPDLIRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPL 216 Query: 236 PGEPNLVVYVWVDAPIGYISFTEKACEEKGCDWRKIWIDGDAEIIHFIGLDIVYHHCIFW 295 P + N V YVW DA + Y+S + +G +R W H IG DI+ H +FW Sbjct: 217 PWDENHVTYVWFDALLNYVSALDYP---EGEAYRTFW----PHAWHLIGKDILKPHAVFW 269 Query: 296 PAMLKGADYALPSAVVASGMVKV-EGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNY 354 P MLK A + + G + +G+ SK+ G VV + L D LRYY++ Sbjct: 270 PTMLKAAGIPMYRHLNVGGFLLGPDGRKMSKTLGNVV--DPFALLEKYGRDALRYYLLRE 327 Query: 355 TSHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEVRMEGVDEEVLEKIRET 414 + +D S E R + ++ LGN + R ++ E V E L + Sbjct: 328 IPYGQDTPVSEEALRTRYEADLADDLGNLVQRTRAMLFRFAEGRIPEPVAGEELAEGTGL 387 Query: 415 EQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKTDKEAARRAVASCLQLAKA 474 ++ + E +F A + M N Y KPWEL K + E AR + ++ + Sbjct: 388 AGRLRPLVRELKFHVALEEAMAYVKALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRI 447 Query: 475 LIIFAYPVMPESMERMAKAIGLDLENVRLSDAYK--VDEVMKL-SKPEVPFAK 524 I P MP+ M + +A+GL E VRL +A + + E + + V F K Sbjct: 448 ASILLTPAMPDKMAELRRALGLK-EEVRLEEAERWGLAEPRPIPEEAPVLFPK 499 >/seq/databases/pdb/scratch/pdb1ffy.ent Chain A Length = 917 Score = 148 bits (375), Expect = 8e-36 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 16/170 (9%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 ++ G PYANG H+GH + D VRY M G +V G D HG PI ++G+ Sbjct: 51 ILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGV 110 Query: 63 S------------PKELVDIYHEHFIKIFDALNIKFDF---YGRTDSDYHHHRTTEIVKR 107 KE E K F L ++ DF Y +Y + I Sbjct: 111 DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIR-IFGE 169 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCG 157 + +KG +Y + + + P + L + +E ++ G Sbjct: 170 MADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKG 219 Score = 85.2 bits (211), Expect = 8e-17 Identities = 62/394 (15%), Positives = 117/394 (28%), Gaps = 88/394 (22%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKGTENA-LNYARNWVKNLRDWCIT 226 P FR+ +F +++ + + D + N N V++ +W I+ Sbjct: 395 PHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVIS 454 Query: 227 RNLEWGVRFPGE--PNLVVY-------------------VWVDA------PIGYIS-FTE 258 R WGV P N + +W + P G+ + Sbjct: 455 RQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSP 514 Query: 259 KACEEKGCDWRKIWIDGD---------------AEIIHFIGLDIVY--HHCIFWPAMLKG 301 K D +W D ++ G D + ++ Sbjct: 515 NGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNS----SITTS 570 Query: 302 ADYALPSA---VVASGMVKV-EGKTFSKSRGYVVWVEEDYLKSGLSPDYLRY------YI 351 S +++ G V EGK SKS G V+ ++ + G D R Y+ Sbjct: 571 VATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG--ADIARLWVSSTDYL 628 Query: 352 VNYTSHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFG----------EVRME 401 D+ S E+ ++ + L F N E + Sbjct: 629 A-------DVRISDEILKQT-----SDDY-RKIRNTLRFMLGNINDFNPDTDSIPESELL 675 Query: 402 GVDEEVLEKIRETEQKILSALEEWEFKAASDAFMELAT--YGNVYFQNAKPWELIKTDKE 459 VD +L ++RE ++ E +++ N Y K I+ Sbjct: 676 EVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDS 735 Query: 460 AARRAVASCLQ-LAKALIIFAYPVMPESMERMAK 492 RR++ + L + + P++ + E + Sbjct: 736 HIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWS 769 >/seq/databases/pdb/scratch/pdb1qu2.ent Chain A Length = 917 Score = 148 bits (375), Expect = 8e-36 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 16/170 (9%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 ++ G PYANG H+GH + D VRY M G +V G D HG PI ++G+ Sbjct: 51 ILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGV 110 Query: 63 S------------PKELVDIYHEHFIKIFDALNIKFDF---YGRTDSDYHHHRTTEIVKR 107 KE E K F L ++ DF Y +Y + I Sbjct: 111 DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIR-IFGE 169 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCG 157 + +KG +Y + + + P + L + +E ++ G Sbjct: 170 MADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKG 219 Score = 85.2 bits (211), Expect = 8e-17 Identities = 62/394 (15%), Positives = 117/394 (28%), Gaps = 88/394 (22%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKGTENA-LNYARNWVKNLRDWCIT 226 P FR+ +F +++ + + D + N N V++ +W I+ Sbjct: 395 PHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVIS 454 Query: 227 RNLEWGVRFPGE--PNLVVY-------------------VWVDA------PIGYIS-FTE 258 R WGV P N + +W + P G+ + Sbjct: 455 RQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSP 514 Query: 259 KACEEKGCDWRKIWIDGD---------------AEIIHFIGLDIVY--HHCIFWPAMLKG 301 K D +W D ++ G D + ++ Sbjct: 515 NGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNS----SITTS 570 Query: 302 ADYALPSA---VVASGMVKV-EGKTFSKSRGYVVWVEEDYLKSGLSPDYLRY------YI 351 S +++ G V EGK SKS G V+ ++ + G D R Y+ Sbjct: 571 VATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG--ADIARLWVSSTDYL 628 Query: 352 VNYTSHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFG----------EVRME 401 D+ S E+ ++ + L F N E + Sbjct: 629 A-------DVRISDEILKQT-----SDDY-RKIRNTLRFMLGNINDFNPDTDSIPESELL 675 Query: 402 GVDEEVLEKIRETEQKILSALEEWEFKAASDAFMELAT--YGNVYFQNAKPWELIKTDKE 459 VD +L ++RE ++ E +++ N Y K I+ Sbjct: 676 EVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDS 735 Query: 460 AARRAVASCLQ-LAKALIIFAYPVMPESMERMAK 492 RR++ + L + + P++ + E + Sbjct: 736 HIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWS 769 >/seq/databases/pdb/scratch/pdb1qu3.ent Chain A Length = 880 Score = 147 bits (374), Expect = 1e-35 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 16/170 (9%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 ++ G PYANG H+GH + D VRY M G +V G D HG PI ++G+ Sbjct: 50 ILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGV 109 Query: 63 S------------PKELVDIYHEHFIKIFDALNIKFDF---YGRTDSDYHHHRTTEIVKR 107 KE E K F L ++ DF Y +Y + I Sbjct: 110 DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIR-IFGE 168 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCG 157 + +KG +Y + + + P + L + +E ++ G Sbjct: 169 MADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKG 218 Score = 84.8 bits (210), Expect = 1e-16 Identities = 62/394 (15%), Positives = 117/394 (28%), Gaps = 88/394 (22%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKGTENA-LNYARNWVKNLRDWCIT 226 P FR+ +F +++ + + D + N N V++ +W I+ Sbjct: 394 PHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVIS 453 Query: 227 RNLEWGVRFPGE--PNLVVY-------------------VWVDA------PIGYIS-FTE 258 R WGV P N + +W + P G+ + Sbjct: 454 RQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSP 513 Query: 259 KACEEKGCDWRKIWIDGD---------------AEIIHFIGLDIVY--HHCIFWPAMLKG 301 K D +W D ++ G D + ++ Sbjct: 514 NGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNS----SITTS 569 Query: 302 ADYALPSA---VVASGMVKV-EGKTFSKSRGYVVWVEEDYLKSGLSPDYLRY------YI 351 S +++ G V EGK SKS G V+ ++ + G D R Y+ Sbjct: 570 VATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG--ADIARLWVSSTDYL 627 Query: 352 VNYTSHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFG----------EVRME 401 D+ S E+ ++ + L F N E + Sbjct: 628 A-------DVRISDEILKQT-----SDDY-RKIRNTLRFMLGNINDFNPDTDSIPESELL 674 Query: 402 GVDEEVLEKIRETEQKILSALEEWEFKAASDAFMELAT--YGNVYFQNAKPWELIKTDKE 459 VD +L ++RE ++ E +++ N Y K I+ Sbjct: 675 EVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDS 734 Query: 460 AARRAVASCLQ-LAKALIIFAYPVMPESMERMAK 492 RR++ + L + + P++ + E + Sbjct: 735 HIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWS 768 >/seq/databases/pdb/scratch/pdb1gax.ent Chain A Length = 862 Score = 129 bits (326), Expect = 4e-30 Identities = 64/379 (16%), Positives = 133/379 (34%), Gaps = 61/379 (16%) Query: 170 CKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG---TENALNYARNWVKNLRDWCIT 226 C CG+ E+ ++ ++ + + L + E +W++N++DW I+ Sbjct: 344 CSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNIS 403 Query: 227 RNLEWGVRFP-GEPNLVVYVWVDAPIGYI----SFTEKAC---EEKGCDWRKI------- 271 R L WG + P V V P Y+ S + + Sbjct: 404 RQLWWGHQIPAWYCEDCQAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALWP 463 Query: 272 -----WIDGD-------AEIIHFIGLDIVYHHCIFWPAMLKGADY-----ALPSAVVASG 314 W + + G DI++ W + ++ + Y V+ G Sbjct: 464 LSTLGWPEETEDLKAFYPGDVLVTGYDILFL----WVSRMEVSGYHFMGERPFKTVLLHG 519 Query: 315 MVKVE-GKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTSHQKDLNFSWEVFREKVN 373 +V E G+ SKS+G V+ E + D LR+ ++ + +D+ + Sbjct: 520 LVLDEKGQKMSKSKGNVIDPLE--MVERYGADALRFALIYLATGGQDIR-----LDLRW- 571 Query: 374 NEVIATLGNFLYRVLLFAWKNFGEVRMEGVDEEVLEKIRET-----EQKILSALEEWEFK 428 E+ N LY F + + + + ++ + ++I + E + Sbjct: 572 LEMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSRGVEEITALYEALDLA 631 Query: 429 AASDAFMEL--ATYGNVYFQNAKPWELIKTDKEAARRAVASCLQLAKALIIFAYPVMPES 486 A+ EL + + + Y + AKP +K R + ++ L+ +P+MP Sbjct: 632 QAAREVYELVWSEFCDWYLEAAKP--ALKAGNAHTLRTLE---EVLAVLLKLLHPMMPFL 686 Query: 487 MERMAKAI-GLDLENVRLS 504 + +A+ G + + Sbjct: 687 TSELYQALTGKEELALEAW 705 Score = 101 bits (253), Expect = 1e-21 Identities = 35/149 (23%), Positives = 54/149 (35%), Gaps = 18/149 (12%) Query: 7 GLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAE----QQGL 62 P G H+GH D +RY RM G E V++ G+D G V E ++G Sbjct: 41 PPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGK 100 Query: 63 SPKEL-VDIYHEH-----------FIKIFDALNIKFDFYGR--TDSDYHHHRTTEIVKRL 108 + +L + + E +K L D+ T + R Sbjct: 101 TRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRY 160 Query: 109 IEKGYVYPKEIQLAYCPKCQRFLPDRYVE 137 +G Y + +CP+C+ L D VE Sbjct: 161 YHEGLAYRAPRLVNWCPRCETTLSDLEVE 189 >/seq/databases/pdb/scratch/pdb1gax.ent Chain B Length = 862 Score = 129 bits (326), Expect = 4e-30 Identities = 64/379 (16%), Positives = 133/379 (34%), Gaps = 61/379 (16%) Query: 170 CKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG---TENALNYARNWVKNLRDWCIT 226 C CG+ E+ ++ ++ + + L + E +W++N++DW I+ Sbjct: 344 CSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNIS 403 Query: 227 RNLEWGVRFP-GEPNLVVYVWVDAPIGYI----SFTEKAC---EEKGCDWRKI------- 271 R L WG + P V V P Y+ S + + Sbjct: 404 RQLWWGHQIPAWYCEDCQAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALWP 463 Query: 272 -----WIDGD-------AEIIHFIGLDIVYHHCIFWPAMLKGADY-----ALPSAVVASG 314 W + + G DI++ W + ++ + Y V+ G Sbjct: 464 LSTLGWPEETEDLKAFYPGDVLVTGYDILFL----WVSRMEVSGYHFMGERPFKTVLLHG 519 Query: 315 MVKVE-GKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTSHQKDLNFSWEVFREKVN 373 +V E G+ SKS+G V+ E + D LR+ ++ + +D+ + Sbjct: 520 LVLDEKGQKMSKSKGNVIDPLE--MVERYGADALRFALIYLATGGQDIR-----LDLRW- 571 Query: 374 NEVIATLGNFLYRVLLFAWKNFGEVRMEGVDEEVLEKIRET-----EQKILSALEEWEFK 428 E+ N LY F + + + + ++ + ++I + E + Sbjct: 572 LEMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSRGVEEITALYEALDLA 631 Query: 429 AASDAFMEL--ATYGNVYFQNAKPWELIKTDKEAARRAVASCLQLAKALIIFAYPVMPES 486 A+ EL + + + Y + AKP +K R + ++ L+ +P+MP Sbjct: 632 QAAREVYELVWSEFCDWYLEAAKP--ALKAGNAHTLRTLE---EVLAVLLKLLHPMMPFL 686 Query: 487 MERMAKAI-GLDLENVRLS 504 + +A+ G + + Sbjct: 687 TSELYQALTGKEELALEAW 705 Score = 101 bits (253), Expect = 1e-21 Identities = 35/149 (23%), Positives = 54/149 (35%), Gaps = 18/149 (12%) Query: 7 GLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAE----QQGL 62 P G H+GH D +RY RM G E V++ G+D G V E ++G Sbjct: 41 PPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGK 100 Query: 63 SPKEL-VDIYHEH-----------FIKIFDALNIKFDFYGR--TDSDYHHHRTTEIVKRL 108 + +L + + E +K L D+ T + R Sbjct: 101 TRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRY 160 Query: 109 IEKGYVYPKEIQLAYCPKCQRFLPDRYVE 137 +G Y + +CP+C+ L D VE Sbjct: 161 YHEGLAYRAPRLVNWCPRCETTLSDLEVE 189 >/seq/databases/pdb/scratch/pdb1ile.ent Chain Length = 821 Score = 124 bits (312), Expect = 2e-28 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 19/149 (12%) Query: 7 GLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQ-GLSPK 65 G P ANG HVGH + D++ RY M G G D HG P+ + E++ GL K Sbjct: 45 GPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELEVEKKLGLKSK 104 Query: 66 ELVDIY-HEHF-----------IKIFDALNIKFDFYGRTDSDY------HHHRTTEIVKR 107 ++ Y E F K ++A + ++ + Y + +K Sbjct: 105 REIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTYIESIWWSLKN 164 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYV 136 L ++G +Y + YCP+C L V Sbjct: 165 LFDRGLLYRDHKVVPYCPRCGTPLSSHEV 193 Score = 61.3 bits (149), Expect = 1e-09 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG-TENALN-YARNWVKNLRDWCI 225 P C C + + + +F K T F+D L ++ + W+KNL DW + Sbjct: 387 PHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWAL 446 Query: 226 TRNLEWGVRFP 236 +RN WG P Sbjct: 447 SRNRYWGTPLP 457 >/seq/databases/pdb/scratch/pdb1jzq.ent Chain A Length = 821 Score = 124 bits (312), Expect = 2e-28 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 19/149 (12%) Query: 7 GLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQ-GLSPK 65 G P ANG HVGH + D++ RY M G G D HG P+ + E++ GL K Sbjct: 45 GPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELEVEKKLGLKSK 104 Query: 66 ELVDIY-HEHF-----------IKIFDALNIKFDFYGRTDSDY------HHHRTTEIVKR 107 ++ Y E F K ++A + ++ + Y + +K Sbjct: 105 REIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTYIESIWWSLKN 164 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYV 136 L ++G +Y + YCP+C L V Sbjct: 165 LFDRGLLYRDHKVVPYCPRCGTPLSSHEV 193 Score = 61.3 bits (149), Expect = 1e-09 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG-TENALN-YARNWVKNLRDWCI 225 P C C + + + +F K T F+D L ++ + W+KNL DW + Sbjct: 387 PHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWAL 446 Query: 226 TRNLEWGVRFP 236 +RN WG P Sbjct: 447 SRNRYWGTPLP 457 >/seq/databases/pdb/scratch/pdb1jzs.ent Chain A Length = 821 Score = 124 bits (312), Expect = 2e-28 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 19/149 (12%) Query: 7 GLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQ-GLSPK 65 G P ANG HVGH + D++ RY M G G D HG P+ + E++ GL K Sbjct: 45 GPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELEVEKKLGLKSK 104 Query: 66 ELVDIY-HEHF-----------IKIFDALNIKFDFYGRTDSDY------HHHRTTEIVKR 107 ++ Y E F K ++A + ++ + Y + +K Sbjct: 105 REIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTYIESIWWSLKN 164 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYV 136 L ++G +Y + YCP+C L V Sbjct: 165 LFDRGLLYRDHKVVPYCPRCGTPLSSHEV 193 Score = 61.3 bits (149), Expect = 1e-09 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG-TENALN-YARNWVKNLRDWCI 225 P C C + + + +F K T F+D L ++ + W+KNL DW + Sbjct: 387 PHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWAL 446 Query: 226 TRNLEWGVRFP 236 +RN WG P Sbjct: 447 SRNRYWGTPLP 457 >/seq/databases/pdb/scratch/pdb1med.ent Chain Length = 308 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 163 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 212 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 51 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 100 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 247 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 296 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 107 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 156 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 23 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 72 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 219 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 268 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 135 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 184 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 79 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 128 Score = 41.3 bits (97), Expect = 0.001 Identities = 17/54 (31%), Positives = 24/54 (43%), Gaps = 5/54 (9%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 C C DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 191 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 240 Score = 39.0 bits (91), Expect = 0.008 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Query: 133 DRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSK 176 DR+V+G CP C + + GD C+ CG + + C C S Sbjct: 3 DRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSP 44 Score = 37.4 bits (87), Expect = 0.020 Identities = 14/36 (38%), Positives = 19/36 (51%), Gaps = 3/36 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGR 158 C C DR+V+G CP C + + GD C+ CG Sbjct: 275 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGA 308 >/seq/databases/pdb/scratch/pdb1iq0.ent Chain A Length = 588 Score = 37.4 bits (87), Expect = 0.019 Identities = 15/40 (37%), Positives = 19/40 (47%) Query: 11 ANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHG 50 N + HVGHLR D R L +G EV+ + D G Sbjct: 114 PNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTG 153 >/seq/databases/pdb/scratch/pdb1ir4.ent Chain A Length = 588 Score = 37.4 bits (87), Expect = 0.019 Identities = 15/40 (37%), Positives = 19/40 (47%) Query: 11 ANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHG 50 N + HVGHLR D R L +G EV+ + D G Sbjct: 114 PNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTG 153 >/seq/databases/pdb/scratch/pdb1jil.ent Chain A Length = 323 Score = 36.7 bits (85), Expect = 0.038 Identities = 20/81 (24%), Positives = 31/81 (37%), Gaps = 8/81 (9%) Query: 1 MKLVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEE--VVFVCGSDCHGTPIVVNAE 58 + L P A H+GHL ++ R+ G V+ G+ G P +E Sbjct: 32 VTLYCGADPTA-DSLHIGHLLPFL---TLRRFQE-HGHRPIVLIGGGTGMIGDP-SGKSE 85 Query: 59 QQGLSPKELVDIYHEHFIKIF 79 ++ L +E VD E K Sbjct: 86 ERVLQTEEQVDKNIEGISKQM 106 >/seq/databases/pdb/scratch/pdb1jii.ent Chain A Length = 319 Score = 36.7 bits (85), Expect = 0.038 Identities = 20/81 (24%), Positives = 31/81 (37%), Gaps = 8/81 (9%) Query: 1 MKLVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEE--VVFVCGSDCHGTPIVVNAE 58 + L P A H+GHL ++ R+ G V+ G+ G P +E Sbjct: 32 VTLYCGADPTA-DSLHIGHLLPFL---TLRRFQE-HGHRPIVLIGGGTGMIGDP-SGKSE 85 Query: 59 QQGLSPKELVDIYHEHFIKIF 79 ++ L +E VD E K Sbjct: 86 ERVLQTEEQVDKNIEGISKQM 106 >/seq/databases/pdb/scratch/pdb1jij.ent Chain A Length = 319 Score = 36.7 bits (85), Expect = 0.038 Identities = 20/81 (24%), Positives = 31/81 (37%), Gaps = 8/81 (9%) Query: 1 MKLVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEE--VVFVCGSDCHGTPIVVNAE 58 + L P A H+GHL ++ R+ G V+ G+ G P +E Sbjct: 32 VTLYCGADPTA-DSLHIGHLLPFL---TLRRFQE-HGHRPIVLIGGGTGMIGDP-SGKSE 85 Query: 59 QQGLSPKELVDIYHEHFIKIF 79 ++ L +E VD E K Sbjct: 86 ERVLQTEEQVDKNIEGISKQM 106 >/seq/databases/pdb/scratch/pdb1jik.ent Chain A Length = 319 Score = 36.7 bits (85), Expect = 0.038 Identities = 20/81 (24%), Positives = 31/81 (37%), Gaps = 8/81 (9%) Query: 1 MKLVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEE--VVFVCGSDCHGTPIVVNAE 58 + L P A H+GHL ++ R+ G V+ G+ G P +E Sbjct: 32 VTLYCGADPTA-DSLHIGHLLPFL---TLRRFQE-HGHRPIVLIGGGTGMIGDP-SGKSE 85 Query: 59 QQGLSPKELVDIYHEHFIKIF 79 ++ L +E VD E K Sbjct: 86 ERVLQTEEQVDKNIEGISKQM 106 >/seq/databases/pdb/scratch/pdb1qrt.ent Chain A Length = 529 Score = 36.3 bits (84), Expect = 0.051 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1qru.ent Chain A Length = 529 Score = 36.3 bits (84), Expect = 0.051 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1qrs.ent Chain A Length = 529 Score = 36.3 bits (84), Expect = 0.053 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1euq.ent Chain A Length = 529 Score = 35.9 bits (83), Expect = 0.053 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1euy.ent Chain A Length = 529 Score = 35.9 bits (83), Expect = 0.053 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1exd.ent Chain A Length = 529 Score = 35.9 bits (83), Expect = 0.053 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1gts.ent Chain A Length = 529 Score = 35.9 bits (83), Expect = 0.053 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1qtq.ent Chain A Length = 529 Score = 35.9 bits (83), Expect = 0.053 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1gsg.ent Chain P Length = 526 Score = 35.9 bits (83), Expect = 0.054 Identities = 23/115 (20%), Positives = 32/115 (27%), Gaps = 27/115 (23%) Query: 8 LPYANGKAHVGHL----RTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGLS 63 P NG H+GH + A Y + D + Sbjct: 25 PPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLR---------FDD-------------TN 62 Query: 64 PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKE 118 P + Y E + L + R SDY ++ LI KG Y E Sbjct: 63 PVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIE-LINKGLAYVDE 116 >/seq/databases/pdb/scratch/pdb1mea.ent Chain Length = 28 Score = 34.7 bits (80), Expect = 0.12 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Query: 133 DRYVEGICPYCGALAR-GDECDQGCGR 158 DR+V+G CP C + + GD C+ CG Sbjct: 3 DRFVKGTCPKCKSPDQYGDNCEV-CGA 28 >/seq/databases/pdb/scratch/pdb1f7u.ent Chain A Length = 606 Score = 30.9 bits (70), Expect = 2.1 Identities = 14/65 (21%), Positives = 25/65 (37%), Gaps = 1/65 (1%) Query: 58 EQQGLSPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPK 117 E+ K + E +I + LNIK+D Y +S + + EKG + Sbjct: 259 EEALKIWKRFREFSIEKYIDTYARLNIKYDVYS-GESQVSKESMLKAIDLFKEKGLTHED 317 Query: 118 EIQLA 122 + + Sbjct: 318 KGAVL 322 >/seq/databases/pdb/scratch/pdb1f7v.ent Chain A Length = 606 Score = 30.9 bits (70), Expect = 2.1 Identities = 14/65 (21%), Positives = 25/65 (37%), Gaps = 1/65 (1%) Query: 58 EQQGLSPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPK 117 E+ K + E +I + LNIK+D Y +S + + EKG + Sbjct: 259 EEALKIWKRFREFSIEKYIDTYARLNIKYDVYS-GESQVSKESMLKAIDLFKEKGLTHED 317 Query: 118 EIQLA 122 + + Sbjct: 318 KGAVL 322 >/seq/databases/pdb/scratch/pdb1bs2.ent Chain A Length = 603 Score = 30.9 bits (70), Expect = 2.2 Identities = 14/65 (21%), Positives = 25/65 (37%), Gaps = 1/65 (1%) Query: 58 EQQGLSPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPK 117 E+ K + E +I + LNIK+D Y +S + + EKG + Sbjct: 256 EEALKIWKRFREFSIEKYIDTYARLNIKYDVYS-GESQVSKESMLKAIDLFKEKGLTHED 314 Query: 118 EIQLA 122 + + Sbjct: 315 KGAVL 319 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: /seq/databases/pdb/scratch/pdb1f4l.ent Chain A 753 0.0 /seq/databases/pdb/scratch/pdb1qqt.ent Chain A 751 0.0 /seq/databases/pdb/scratch/pdb1a8h.ent Chain 628 e-180 /seq/databases/pdb/scratch/pdb1gax.ent Chain A 366 e-101 /seq/databases/pdb/scratch/pdb1gax.ent Chain B 366 e-101 /seq/databases/pdb/scratch/pdb1ffy.ent Chain A 349 3e-96 /seq/databases/pdb/scratch/pdb1qu2.ent Chain A 349 3e-96 /seq/databases/pdb/scratch/pdb1qu3.ent Chain A 349 3e-96 /seq/databases/pdb/scratch/pdb1ile.ent Chain 175 6e-44 /seq/databases/pdb/scratch/pdb1jzq.ent Chain A 175 6e-44 /seq/databases/pdb/scratch/pdb1jzs.ent Chain A 175 6e-44 /seq/databases/pdb/scratch/pdb1med.ent Chain 70 3e-12 Sequences not found previously or not previously below threshold: /seq/databases/pdb/scratch/pdb1mea.ent Chain 45 1e-04 /seq/databases/pdb/scratch/pdb1iml.ent Chain 33 0.50 /seq/databases/pdb/scratch/pdb1ezv.ent Chain A 29 7.4 >/seq/databases/pdb/scratch/pdb1f4l.ent Chain A Length = 545 Score = 753 bits (1947), Expect = 0.0 Identities = 177/547 (32%), Positives = 280/547 (50%), Gaps = 16/547 (2%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 LVTC LPYANG H+GH+ ++ ADV+VRY RM G EV F+C D HGTPI++ A+Q G+ Sbjct: 5 LVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGI 64 Query: 63 SPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLA 122 +P++++ + F NI +D Y T S+ + + I RL E G++ + I Sbjct: 65 TPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQL 124 Query: 123 YCPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEFRS 181 Y P+ FLPDR+V+G CP C + + GD C+ CG P E+ EP+ + G+ R Sbjct: 125 YDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEV-CGATYSPTELIEPKSVVSGATPVMRD 183 Query: 182 QRHYFFKLTEFQDFLEDYLSKLKGTENALNYARNWVK-NLRDWCITRNLE-WGVRFPGEP 239 H+FF L F + L+ + E N + W + L+ W I+R+ +G P P Sbjct: 184 SEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAP 243 Query: 240 NLVVYVWVDAPIGYISFTEKACEEKGC--DWRKIW-IDGDAEIIHFIGLDIVYHHCIFWP 296 YVW+DAPIGY+ + C+++G + + W D AE+ HFIG DIVY H +FWP Sbjct: 244 GKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWP 303 Query: 297 AMLKGADYALPSAVVASGMVKVEGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYI-VNYT 355 AML+G+++ PS + G V V G SKSRG +++ + D LRYY + Sbjct: 304 AMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRG--TFIKASTWLNHFDADSLRYYYTAKLS 361 Query: 356 SHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEV-RMEGVDEEVLEKIRET 414 S D++ + E F ++VN +++ + N R F K F V E D ++ + + Sbjct: 362 SRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYKTFTDA 421 Query: 415 EQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKTD-KEAARRAVASC-LQLA 472 + I A E EF A M LA N Y PW + K + ++A +A+ S + L Sbjct: 422 AEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLF 481 Query: 473 KALIIFAYPVMPESMERMAKAIGLDLENVRLSDAYKVDEVMKLSKPEVPFAKVEDEVIEK 532 + L+ + PV+P+ ER + +L + K++ + + +++ +E Sbjct: 482 RVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLL---GHKVNPFKALYNRIDMRQVEA 538 Query: 533 LQKVMEK 539 L + ++ Sbjct: 539 LVEASKE 545 >/seq/databases/pdb/scratch/pdb1qqt.ent Chain A Length = 546 Score = 751 bits (1941), Expect = 0.0 Identities = 177/547 (32%), Positives = 278/547 (50%), Gaps = 16/547 (2%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 LVTC LPYANG H+GH+ ++ ADV+VRY RM G EV F+C D HGTPI++ A+Q G+ Sbjct: 6 LVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGI 65 Query: 63 SPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLA 122 +P++++ + F NI +D Y T S+ + + I RL E G++ + I Sbjct: 66 TPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQL 125 Query: 123 YCPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEFRS 181 Y P+ FLPDR+V+G CP C + + GD C+ CG P E+ EP+ + G+ R Sbjct: 126 YDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEV-CGATYSPTELIEPKSVVSGATPVMRD 184 Query: 182 QRHYFFKLTEFQDFLEDYLSKLKGTENALNYARNWVK-NLRDWCITRNLE-WGVRFPGEP 239 H+FF L F + L+ + E N + W + L+ W I+R+ +G P P Sbjct: 185 SEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAP 244 Query: 240 NLVVYVWVDAPIGYISFTEKACEEKGC--DWRKIW-IDGDAEIIHFIGLDIVYHHCIFWP 296 YVW+DAPIGY+ + C+++G + + W D AE+ HFIG DIVY H +FWP Sbjct: 245 GKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWP 304 Query: 297 AMLKGADYALPSAVVASGMVKVEGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYI-VNYT 355 AML+G+++ PS + G V V G SKSRG +++ + D LRYY + Sbjct: 305 AMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRG--TFIKASTWLNHFDADSLRYYYTAKLS 362 Query: 356 SHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEV-RMEGVDEEVLEKIRET 414 S D++ + E F ++VN +++ + N R F K F V E D + + + Sbjct: 363 SRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPALYKTFTDA 422 Query: 415 EQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKT-DKEAARRAVASC-LQLA 472 + I A E EF A M LA N Y PW + K ++A +A+ S + L Sbjct: 423 AEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQAGRDADLQAICSMGINLF 482 Query: 473 KALIIFAYPVMPESMERMAKAIGLDLENVRLSDAYKVDEVMKLSKPEVPFAKVEDEVIEK 532 + L+ + PV+P+ ER + +L + K++ + + +++ +E Sbjct: 483 RVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLL---GHKVNPFKALYNRIDMRQVEA 539 Query: 533 LQKVMEK 539 L + ++ Sbjct: 540 LVEASKE 546 >/seq/databases/pdb/scratch/pdb1a8h.ent Chain Length = 500 Score = 628 bits (1622), Expect = e-180 Identities = 144/533 (27%), Positives = 231/533 (43%), Gaps = 50/533 (9%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 VT + Y N + H+GH T V AD R+ R+ G F+ G+D HG + A+ G Sbjct: 6 YVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGE 65 Query: 63 SPKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKGYVYPKEIQLA 122 PK VD F + +D L I +D + RT + H ++K++ E G +Y E + Sbjct: 66 DPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEGL 125 Query: 123 YCPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGEIKEPRCKICGSKAEFRSQ 182 YC C+RF ++ E+ E C I G E R + Sbjct: 126 YCVSCERFYTEK-----------------------------ELVEGLCPIHGRPVERRKE 156 Query: 183 RHYFFKLTEFQDFLEDYLSKLKGTENALNYARNWV----KNLRDWCITR---NLEWGVRF 235 +YFF++ +++ +L++Y+ + Y + + + D I+R + WG+ Sbjct: 157 GNYFFRMEKYRPWLQEYIQENPDLIRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPL 216 Query: 236 PGEPNLVVYVWVDAPIGYISFTEKACEEKGCDWRKIWIDGDAEIIHFIGLDIVYHHCIFW 295 P + N V YVW DA + Y+S + +G +R W H IG DI+ H +FW Sbjct: 217 PWDENHVTYVWFDALLNYVSALDYP---EGEAYRTFW----PHAWHLIGKDILKPHAVFW 269 Query: 296 PAMLKGADYALPSAVVASGMVKV-EGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNY 354 P MLK A + + G + +G+ SK+ G VV + L D LRYY++ Sbjct: 270 PTMLKAAGIPMYRHLNVGGFLLGPDGRKMSKTLGNVV--DPFALLEKYGRDALRYYLLRE 327 Query: 355 TSHQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEVRMEGVDEEVLEKIRET 414 + +D S E R + ++ LGN + R ++ E V E L + Sbjct: 328 IPYGQDTPVSEEALRTRYEADLADDLGNLVQRTRAMLFRFAEGRIPEPVAGEELAEGTGL 387 Query: 415 EQKILSALEEWEFKAASDAFMELATYGNVYFQNAKPWELIKTDKEAARRAVASCLQLAKA 474 ++ + E +F A + M N Y KPWEL K + E AR + ++ + Sbjct: 388 AGRLRPLVRELKFHVALEEAMAYVKALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRI 447 Query: 475 LIIFAYPVMPESMERMAKAIGLDLENVRLSDAYK--VDEVMKL-SKPEVPFAK 524 I P MP+ M + +A+GL E VRL +A + + E + + V F K Sbjct: 448 ASILLTPAMPDKMAELRRALGLKEE-VRLEEAERWGLAEPRPIPEEAPVLFPK 499 >/seq/databases/pdb/scratch/pdb1gax.ent Chain A Length = 862 Score = 366 bits (942), Expect = e-101 Identities = 64/380 (16%), Positives = 131/380 (33%), Gaps = 61/380 (16%) Query: 169 RCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG---TENALNYARNWVKNLRDWCI 225 C CG+ E+ ++ ++ + + L + E +W++N++DW I Sbjct: 343 TCSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNI 402 Query: 226 TRNLEWGVRFP-GEPNLVVYVWVDAPIGY----ISFTEKAC---EEKGCDWRKI------ 271 +R L WG + P V V P Y S + + Sbjct: 403 SRQLWWGHQIPAWYCEDCQAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALW 462 Query: 272 ------WIDGD-------AEIIHFIGLDIVYHHCIFWPAMLKGADY-----ALPSAVVAS 313 W + + G DI++ W + ++ + Y V+ Sbjct: 463 PLSTLGWPEETEDLKAFYPGDVLVTGYDILFL----WVSRMEVSGYHFMGERPFKTVLLH 518 Query: 314 GMVKVE-GKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTSHQKDLNFSWEVFREKV 372 G+V E G+ SKS+G V+ E + D LR+ ++ + +D+ + Sbjct: 519 GLVLDEKGQKMSKSKGNVIDPLE--MVERYGADALRFALIYLATGGQDIR-----LDLRW 571 Query: 373 NNEVIATLGNFLYRVLLFAWKNFGEVRMEGVDEEVLEKIRET-----EQKILSALEEWEF 427 E+ N LY F + + + + ++ + ++I + E + Sbjct: 572 -LEMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSRGVEEITALYEALDL 630 Query: 428 KAASDAFMELA--TYGNVYFQNAKPWELIKTDKEAARRAVASCLQLAKALIIFAYPVMPE 485 A+ EL + + Y + AKP +K R + ++ L+ +P+MP Sbjct: 631 AQAAREVYELVWSEFCDWYLEAAKP--ALKAGNAHTLRTLE---EVLAVLLKLLHPMMPF 685 Query: 486 SMERMAKAI-GLDLENVRLS 504 + +A+ G + + Sbjct: 686 LTSELYQALTGKEELALEAW 705 Score = 165 bits (420), Expect = 4e-41 Identities = 35/149 (23%), Positives = 54/149 (35%), Gaps = 18/149 (12%) Query: 7 GLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAE----QQGL 62 P G H+GH D +RY RM G E V++ G+D G V E ++G Sbjct: 41 PPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGK 100 Query: 63 SPKEL-VDIYHEH-----------FIKIFDALNIKFDFYGR--TDSDYHHHRTTEIVKRL 108 + +L + + E +K L D+ T + R Sbjct: 101 TRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRY 160 Query: 109 IEKGYVYPKEIQLAYCPKCQRFLPDRYVE 137 +G Y + +CP+C+ L D VE Sbjct: 161 YHEGLAYRAPRLVNWCPRCETTLSDLEVE 189 >/seq/databases/pdb/scratch/pdb1gax.ent Chain B Length = 862 Score = 366 bits (942), Expect = e-101 Identities = 64/380 (16%), Positives = 131/380 (33%), Gaps = 61/380 (16%) Query: 169 RCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG---TENALNYARNWVKNLRDWCI 225 C CG+ E+ ++ ++ + + L + E +W++N++DW I Sbjct: 343 TCSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNI 402 Query: 226 TRNLEWGVRFP-GEPNLVVYVWVDAPIGY----ISFTEKAC---EEKGCDWRKI------ 271 +R L WG + P V V P Y S + + Sbjct: 403 SRQLWWGHQIPAWYCEDCQAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALW 462 Query: 272 ------WIDGD-------AEIIHFIGLDIVYHHCIFWPAMLKGADY-----ALPSAVVAS 313 W + + G DI++ W + ++ + Y V+ Sbjct: 463 PLSTLGWPEETEDLKAFYPGDVLVTGYDILFL----WVSRMEVSGYHFMGERPFKTVLLH 518 Query: 314 GMVKVE-GKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTSHQKDLNFSWEVFREKV 372 G+V E G+ SKS+G V+ E + D LR+ ++ + +D+ + Sbjct: 519 GLVLDEKGQKMSKSKGNVIDPLE--MVERYGADALRFALIYLATGGQDIR-----LDLRW 571 Query: 373 NNEVIATLGNFLYRVLLFAWKNFGEVRMEGVDEEVLEKIRET-----EQKILSALEEWEF 427 E+ N LY F + + + + ++ + ++I + E + Sbjct: 572 -LEMARNFANKLYNAARFVLLSREGFQAKEDTPTLADRFMRSRLSRGVEEITALYEALDL 630 Query: 428 KAASDAFMELA--TYGNVYFQNAKPWELIKTDKEAARRAVASCLQLAKALIIFAYPVMPE 485 A+ EL + + Y + AKP +K R + ++ L+ +P+MP Sbjct: 631 AQAAREVYELVWSEFCDWYLEAAKP--ALKAGNAHTLRTLE---EVLAVLLKLLHPMMPF 685 Query: 486 SMERMAKAI-GLDLENVRLS 504 + +A+ G + + Sbjct: 686 LTSELYQALTGKEELALEAW 705 Score = 165 bits (420), Expect = 4e-41 Identities = 35/149 (23%), Positives = 54/149 (35%), Gaps = 18/149 (12%) Query: 7 GLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAE----QQGL 62 P G H+GH D +RY RM G E V++ G+D G V E ++G Sbjct: 41 PPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGK 100 Query: 63 SPKEL-VDIYHEH-----------FIKIFDALNIKFDFYGR--TDSDYHHHRTTEIVKRL 108 + +L + + E +K L D+ T + R Sbjct: 101 TRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRY 160 Query: 109 IEKGYVYPKEIQLAYCPKCQRFLPDRYVE 137 +G Y + +CP+C+ L D VE Sbjct: 161 YHEGLAYRAPRLVNWCPRCETTLSDLEVE 189 >/seq/databases/pdb/scratch/pdb1ffy.ent Chain A Length = 917 Score = 349 bits (897), Expect = 3e-96 Identities = 71/407 (17%), Positives = 130/407 (31%), Gaps = 73/407 (17%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKGTENA-LNYARNWVKNLRDWCIT 226 P FR+ +F +++ + + D + N N V++ +W I+ Sbjct: 395 PHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVIS 454 Query: 227 RNLEWGVRFPGE--PNLVVY-------------------VWVDA------PIGYIS-FTE 258 R WGV P N + +W + P G+ + Sbjct: 455 RQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSP 514 Query: 259 KACEEKGCDWRKIWIDGD---------------AEIIHFIGLDIVYHHCIFWPAMLKGAD 303 K D +W D ++ G D F ++ Sbjct: 515 NGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYR--GWFNSSITTSVA 572 Query: 304 YALPSA---VVASGMVKV-EGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTSHQK 359 S +++ G V EGK SKS G V+ ++ + D R + V+ T + Sbjct: 573 TRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQK--GADIARLW-VSSTDYLA 629 Query: 360 DLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFG----------EVRMEGVDEEVLE 409 D+ S E+ ++ + L F N E + VD +L Sbjct: 630 DVRISDEILKQT-----SDDY-RKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLN 683 Query: 410 KIRETEQKILSALEEWEFKAASDAFMELAT--YGNVYFQNAKPWELIKTDKEAARRAVAS 467 ++RE ++ E +++ N Y K I+ RR++ + Sbjct: 684 RLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQT 743 Query: 468 CLQ-LAKALIIFAYPVMPESMERMAKAI-GLDLENVRLSDAYKVDEV 512 L + + P++ + E + + E+V L+D KV EV Sbjct: 744 VLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVEV 790 Score = 218 bits (556), Expect = 9e-57 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 16/170 (9%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 ++ G PYANG H+GH + D VRY M G +V G D HG PI ++G+ Sbjct: 51 ILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGV 110 Query: 63 S------------PKELVDIYHEHFIKIFDALNIKFDF---YGRTDSDYHHHRTTEIVKR 107 KE E K F L ++ DF Y +Y + I Sbjct: 111 DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIR-IFGE 169 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCG 157 + +KG +Y + + + P + L + +E ++ G Sbjct: 170 MADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKG 219 >/seq/databases/pdb/scratch/pdb1qu2.ent Chain A Length = 917 Score = 349 bits (897), Expect = 3e-96 Identities = 71/407 (17%), Positives = 130/407 (31%), Gaps = 73/407 (17%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKGTENA-LNYARNWVKNLRDWCIT 226 P FR+ +F +++ + + D + N N V++ +W I+ Sbjct: 395 PHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVIS 454 Query: 227 RNLEWGVRFPGE--PNLVVY-------------------VWVDA------PIGYIS-FTE 258 R WGV P N + +W + P G+ + Sbjct: 455 RQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSP 514 Query: 259 KACEEKGCDWRKIWIDGD---------------AEIIHFIGLDIVYHHCIFWPAMLKGAD 303 K D +W D ++ G D F ++ Sbjct: 515 NGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYR--GWFNSSITTSVA 572 Query: 304 YALPSA---VVASGMVKV-EGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTSHQK 359 S +++ G V EGK SKS G V+ ++ + D R + V+ T + Sbjct: 573 TRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQK--GADIARLW-VSSTDYLA 629 Query: 360 DLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFG----------EVRMEGVDEEVLE 409 D+ S E+ ++ + L F N E + VD +L Sbjct: 630 DVRISDEILKQT-----SDDY-RKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLN 683 Query: 410 KIRETEQKILSALEEWEFKAASDAFMELAT--YGNVYFQNAKPWELIKTDKEAARRAVAS 467 ++RE ++ E +++ N Y K I+ RR++ + Sbjct: 684 RLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQT 743 Query: 468 CLQ-LAKALIIFAYPVMPESMERMAKAI-GLDLENVRLSDAYKVDEV 512 L + + P++ + E + + E+V L+D KV EV Sbjct: 744 VLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVEV 790 Score = 218 bits (556), Expect = 9e-57 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 16/170 (9%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 ++ G PYANG H+GH + D VRY M G +V G D HG PI ++G+ Sbjct: 51 ILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGV 110 Query: 63 S------------PKELVDIYHEHFIKIFDALNIKFDF---YGRTDSDYHHHRTTEIVKR 107 KE E K F L ++ DF Y +Y + I Sbjct: 111 DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIR-IFGE 169 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCG 157 + +KG +Y + + + P + L + +E ++ G Sbjct: 170 MADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKG 219 >/seq/databases/pdb/scratch/pdb1qu3.ent Chain A Length = 880 Score = 349 bits (896), Expect = 3e-96 Identities = 71/407 (17%), Positives = 130/407 (31%), Gaps = 73/407 (17%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKGTENA-LNYARNWVKNLRDWCIT 226 P FR+ +F +++ + + D + N N V++ +W I+ Sbjct: 394 PHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRGEWVIS 453 Query: 227 RNLEWGVRFPGE--PNLVVY-------------------VWVDA------PIGYIS-FTE 258 R WGV P N + +W + P G+ + Sbjct: 454 RQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSP 513 Query: 259 KACEEKGCDWRKIWIDGD---------------AEIIHFIGLDIVYHHCIFWPAMLKGAD 303 K D +W D ++ G D F ++ Sbjct: 514 NGTFTKETDIMDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYR--GWFNSSITTSVA 571 Query: 304 YALPSA---VVASGMVKV-EGKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTSHQK 359 S +++ G V EGK SKS G V+ ++ + D R + V+ T + Sbjct: 572 TRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQK--GADIARLW-VSSTDYLA 628 Query: 360 DLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFG----------EVRMEGVDEEVLE 409 D+ S E+ ++ + L F N E + VD +L Sbjct: 629 DVRISDEILKQT-----SDDY-RKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLN 682 Query: 410 KIRETEQKILSALEEWEFKAASDAFMELAT--YGNVYFQNAKPWELIKTDKEAARRAVAS 467 ++RE ++ E +++ N Y K I+ RR++ + Sbjct: 683 RLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQT 742 Query: 468 CLQ-LAKALIIFAYPVMPESMERMAKAI-GLDLENVRLSDAYKVDEV 512 L + + P++ + E + + E+V L+D KV EV Sbjct: 743 VLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVVEV 789 Score = 217 bits (555), Expect = 9e-57 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 16/170 (9%) Query: 3 LVTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQGL 62 ++ G PYANG H+GH + D VRY M G +V G D HG PI ++G+ Sbjct: 50 ILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGV 109 Query: 63 S------------PKELVDIYHEHFIKIFDALNIKFDF---YGRTDSDYHHHRTTEIVKR 107 KE E K F L ++ DF Y +Y + I Sbjct: 110 DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIR-IFGE 168 Query: 108 LIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCG 157 + +KG +Y + + + P + L + +E ++ G Sbjct: 169 MADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKG 218 >/seq/databases/pdb/scratch/pdb1ile.ent Chain Length = 821 Score = 175 bits (445), Expect = 6e-44 Identities = 81/438 (18%), Positives = 139/438 (31%), Gaps = 81/438 (18%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG-TENAL-NYARNWVKNLRDWCI 225 P C C + + + +F K T F+D L ++ + W+KNL DW + Sbjct: 387 PHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWAL 446 Query: 226 TRNLEWGVRFPG----EPNLVVYVW----------------VDAPIGYISFTEKACEEKG 265 +RN WG P + D Y+ E AC G Sbjct: 447 SRNRYWGTPLPIWVCQACGKEEAIGSFQELKARATKPLPEPFDPHRPYVDQVELACACGG 506 Query: 266 CDWR-----KIWIDGD---------------------AEIIHFIGLDIVY--HHCIFWPA 297 R +W D G+D + + Sbjct: 507 TMRRVPYVIDVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLG 566 Query: 298 MLKGADYALPSAVVASGMVKVE-GKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTS 356 ++ A V+ G++ E G+ SKS+G VV + + D LR+YI Sbjct: 567 VMLFGSIA-FKNVICHGLILDEKGQKMSKSKGNVV--DPWDIIRKFGADALRWYIYVSAP 623 Query: 357 HQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEVRME-----------GVDE 405 + D F + RE V L+ V F R + +D Sbjct: 624 PEADRRFGPNLVRETV-----RDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDR 678 Query: 406 EVLEKIRETEQKILSALEEWEFKAASDAFMELA--TYGNVYF--QNAKPWELIKTDKEAA 461 +L ++++ Q++ ALE ++ ++ A + Y + W K + Sbjct: 679 WLLARMQDLIQRVTEALEAYDPTTSARALRDFVVEDLSQWYVRRNRRRFW---KNEDALD 735 Query: 462 RRAVASCLQLAKALI-IFAYPVMPESMERMAKAIGLDLENVRLSDAYKVDEVMKLSKPEV 520 R A + L A L+ A P P E + + + + +VRL V Sbjct: 736 REAAYATLYEALVLVATLAAPFTPFLAEVLWQNL---VRSVRLEAKESVHLADWPEADPA 792 Query: 521 PFAKVEDEVIEKLQKVME 538 + + + KV++ Sbjct: 793 LADEALVAQMRAVLKVVD 810 Score = 175 bits (445), Expect = 7e-44 Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 30/185 (16%) Query: 4 VTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQ-GL 62 V G P ANG HVGH + D++ RY M G G D HG P+ + E++ GL Sbjct: 42 VYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELEVEKKLGL 101 Query: 63 SPKELVDIY-HEHF-----------IKIFDALNIKFDFYGRTDSDY------HHHRTTEI 104 K ++ Y E F K ++A + ++ + Y + Sbjct: 102 KSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTYIESIWWS 161 Query: 105 VKRLIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGE 164 +K L ++G +Y + YCP+C L V + Sbjct: 162 LKNLFDRGLLYRDHKVVPYCPRCGTPLSSHEVALGYKEIQDPSV-----------YVRFP 210 Query: 165 IKEPR 169 +KEP+ Sbjct: 211 LKEPK 215 >/seq/databases/pdb/scratch/pdb1jzq.ent Chain A Length = 821 Score = 175 bits (445), Expect = 6e-44 Identities = 81/438 (18%), Positives = 139/438 (31%), Gaps = 81/438 (18%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG-TENAL-NYARNWVKNLRDWCI 225 P C C + + + +F K T F+D L ++ + W+KNL DW + Sbjct: 387 PHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWAL 446 Query: 226 TRNLEWGVRFPG----EPNLVVYVW----------------VDAPIGYISFTEKACEEKG 265 +RN WG P + D Y+ E AC G Sbjct: 447 SRNRYWGTPLPIWVCQACGKEEAIGSFQELKARATKPLPEPFDPHRPYVDQVELACACGG 506 Query: 266 CDWR-----KIWIDGD---------------------AEIIHFIGLDIVY--HHCIFWPA 297 R +W D G+D + + Sbjct: 507 TMRRVPYVIDVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLG 566 Query: 298 MLKGADYALPSAVVASGMVKVE-GKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTS 356 ++ A V+ G++ E G+ SKS+G VV + + D LR+YI Sbjct: 567 VMLFGSIA-FKNVICHGLILDEKGQKMSKSKGNVV--DPWDIIRKFGADALRWYIYVSAP 623 Query: 357 HQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEVRME-----------GVDE 405 + D F + RE V L+ V F R + +D Sbjct: 624 PEADRRFGPNLVRETV-----RDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDR 678 Query: 406 EVLEKIRETEQKILSALEEWEFKAASDAFMELA--TYGNVYF--QNAKPWELIKTDKEAA 461 +L ++++ Q++ ALE ++ ++ A + Y + W K + Sbjct: 679 WLLARMQDLIQRVTEALEAYDPTTSARALRDFVVEDLSQWYVRRNRRRFW---KNEDALD 735 Query: 462 RRAVASCLQLAKALI-IFAYPVMPESMERMAKAIGLDLENVRLSDAYKVDEVMKLSKPEV 520 R A + L A L+ A P P E + + + + +VRL V Sbjct: 736 REAAYATLYEALVLVATLAAPFTPFLAEVLWQNL---VRSVRLEAKESVHLADWPEADPA 792 Query: 521 PFAKVEDEVIEKLQKVME 538 + + + KV++ Sbjct: 793 LADEALVAQMRAVLKVVD 810 Score = 175 bits (445), Expect = 7e-44 Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 30/185 (16%) Query: 4 VTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQ-GL 62 V G P ANG HVGH + D++ RY M G G D HG P+ + E++ GL Sbjct: 42 VYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELEVEKKLGL 101 Query: 63 SPKELVDIY-HEHF-----------IKIFDALNIKFDFYGRTDSDY------HHHRTTEI 104 K ++ Y E F K ++A + ++ + Y + Sbjct: 102 KSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTYIESIWWS 161 Query: 105 VKRLIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGE 164 +K L ++G +Y + YCP+C L V + Sbjct: 162 LKNLFDRGLLYRDHKVVPYCPRCGTPLSSHEVALGYKEIQDPSV-----------YVRFP 210 Query: 165 IKEPR 169 +KEP+ Sbjct: 211 LKEPK 215 >/seq/databases/pdb/scratch/pdb1jzs.ent Chain A Length = 821 Score = 175 bits (445), Expect = 6e-44 Identities = 81/438 (18%), Positives = 139/438 (31%), Gaps = 81/438 (18%) Query: 168 PRCKICGSKAEFRSQRHYFFKLTEFQDFLEDYLSKLKG-TENAL-NYARNWVKNLRDWCI 225 P C C + + + +F K T F+D L ++ + W+KNL DW + Sbjct: 387 PHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVDWAL 446 Query: 226 TRNLEWGVRFPG----EPNLVVYVW----------------VDAPIGYISFTEKACEEKG 265 +RN WG P + D Y+ E AC G Sbjct: 447 SRNRYWGTPLPIWVCQACGKEEAIGSFQELKARATKPLPEPFDPHRPYVDQVELACACGG 506 Query: 266 CDWR-----KIWIDGD---------------------AEIIHFIGLDIVY--HHCIFWPA 297 R +W D G+D + + Sbjct: 507 TMRRVPYVIDVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLG 566 Query: 298 MLKGADYALPSAVVASGMVKVE-GKTFSKSRGYVVWVEEDYLKSGLSPDYLRYYIVNYTS 356 ++ A V+ G++ E G+ SKS+G VV + + D LR+YI Sbjct: 567 VMLFGSIA-FKNVICHGLILDEKGQKMSKSKGNVV--DPWDIIRKFGADALRWYIYVSAP 623 Query: 357 HQKDLNFSWEVFREKVNNEVIATLGNFLYRVLLFAWKNFGEVRME-----------GVDE 405 + D F + RE V L+ V F R + +D Sbjct: 624 PEADRRFGPNLVRETV-----RDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDR 678 Query: 406 EVLEKIRETEQKILSALEEWEFKAASDAFMELA--TYGNVYF--QNAKPWELIKTDKEAA 461 +L ++++ Q++ ALE ++ ++ A + Y + W K + Sbjct: 679 WLLARMQDLIQRVTEALEAYDPTTSARALRDFVVEDLSQWYVRRNRRRFW---KNEDALD 735 Query: 462 RRAVASCLQLAKALI-IFAYPVMPESMERMAKAIGLDLENVRLSDAYKVDEVMKLSKPEV 520 R A + L A L+ A P P E + + + + +VRL V Sbjct: 736 REAAYATLYEALVLVATLAAPFTPFLAEVLWQNL---VRSVRLEAKESVHLADWPEADPA 792 Query: 521 PFAKVEDEVIEKLQKVME 538 + + + KV++ Sbjct: 793 LADEALVAQMRAVLKVVD 810 Score = 175 bits (445), Expect = 7e-44 Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 30/185 (16%) Query: 4 VTCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEEVVFVCGSDCHGTPIVVNAEQQ-GL 62 V G P ANG HVGH + D++ RY M G G D HG P+ + E++ GL Sbjct: 42 VYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELEVEKKLGL 101 Query: 63 SPKELVDIY-HEHF-----------IKIFDALNIKFDFYGRTDSDY------HHHRTTEI 104 K ++ Y E F K ++A + ++ + Y + Sbjct: 102 KSKREIEAYGIERFNQACRESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTYIESIWWS 161 Query: 105 VKRLIEKGYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGE 164 +K L ++G +Y + YCP+C L V + Sbjct: 162 LKNLFDRGLLYRDHKVVPYCPRCGTPLSSHEVALGYKEIQDPSV-----------YVRFP 210 Query: 165 IKEPR 169 +KEP+ Sbjct: 211 LKEPK 215 >/seq/databases/pdb/scratch/pdb1med.ent Chain Length = 308 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 51 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 103 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 247 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 299 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 191 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 243 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 23 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 75 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 219 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 271 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 163 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 215 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 107 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 159 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 135 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 187 Score = 70.3 bits (172), Expect = 3e-12 Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 5/57 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 C C DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 79 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 131 Score = 64.5 bits (157), Expect = 1e-10 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 131 LPDRYVEGICPYCGALAR-GDECDQGCGRHLEPGEIKEPRCKICGSKAEF 179 DR+V+G CP C + + GD C+ CG + + C C S ++ Sbjct: 1 GSDRFVKGTCPKCKSPDQYGDNCEV-CGAGSDRF--VKGTCPKCKSPDQY 47 Score = 50.6 bits (121), Expect = 2e-06 Identities = 14/36 (38%), Positives = 19/36 (51%), Gaps = 3/36 (8%) Query: 124 CPKCQRFLPDRYVEGICPYCGALAR-GDECDQGCGR 158 C C DR+V+G CP C + + GD C+ CG Sbjct: 275 CEVCG-AGSDRFVKGTCPKCKSPDQYGDNCEV-CGA 308 >/seq/databases/pdb/scratch/pdb1mea.ent Chain Length = 28 Score = 45.2 bits (107), Expect = 1e-04 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 131 LPDRYVEGICPYCGALAR-GDECDQGCGR 158 DR+V+G CP C + + GD C+ CG Sbjct: 1 GSDRFVKGTCPKCKSPDQYGDNCEV-CGA 28 >/seq/databases/pdb/scratch/pdb1iml.ent Chain Length = 3648 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2532 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2590 Query: 174 GSKAEFR 180 + F Sbjct: 2591 DKEVYFA 2597 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2912 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2970 Query: 174 GSKAEFR 180 + F Sbjct: 2971 DKEVYFA 2977 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1696 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1754 Query: 174 GSKAEFR 180 + F Sbjct: 1755 DKEVYFA 1761 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2456 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2514 Query: 174 GSKAEFR 180 + F Sbjct: 2515 DKEVYFA 2521 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 556 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 614 Query: 174 GSKAEFR 180 + F Sbjct: 615 DKEVYFA 621 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 176 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 234 Query: 174 GSKAEFR 180 + F Sbjct: 235 DKEVYFA 241 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 480 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 538 Query: 174 GSKAEFR 180 + F Sbjct: 539 DKEVYFA 545 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 328 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 386 Query: 174 GSKAEFR 180 + F Sbjct: 387 DKEVYFA 393 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1164 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1222 Query: 174 GSKAEFR 180 + F Sbjct: 1223 DKEVYFA 1229 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1088 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1146 Query: 174 GSKAEFR 180 + F Sbjct: 1147 DKEVYFA 1153 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1772 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1830 Query: 174 GSKAEFR 180 + F Sbjct: 1831 DKEVYFA 1837 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 3520 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 3578 Query: 174 GSKAEFR 180 + F Sbjct: 3579 DKEVYFA 3585 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1012 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1070 Query: 174 GSKAEFR 180 + F Sbjct: 1071 DKEVYFA 1077 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 3368 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 3426 Query: 174 GSKAEFR 180 + F Sbjct: 3427 DKEVYFA 3433 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2076 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2134 Query: 174 GSKAEFR 180 + F Sbjct: 2135 DKEVYFA 2141 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2380 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2438 Query: 174 GSKAEFR 180 + F Sbjct: 2439 DKEVYFA 2445 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1544 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1602 Query: 174 GSKAEFR 180 + F Sbjct: 1603 DKEVYFA 1609 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 632 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 690 Query: 174 GSKAEFR 180 + F Sbjct: 691 DKEVYFA 697 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 3216 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 3274 Query: 174 GSKAEFR 180 + F Sbjct: 3275 DKEVYFA 3281 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2304 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2362 Query: 174 GSKAEFR 180 + F Sbjct: 2363 DKEVYFA 2369 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2684 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2742 Query: 174 GSKAEFR 180 + F Sbjct: 2743 DKEVYFA 2749 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 3064 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 3122 Query: 174 GSKAEFR 180 + F Sbjct: 3123 DKEVYFA 3129 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 708 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 766 Query: 174 GSKAEFR 180 + F Sbjct: 767 DKEVYFA 773 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 252 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 310 Query: 174 GSKAEFR 180 + F Sbjct: 311 DKEVYFA 317 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2836 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2894 Query: 174 GSKAEFR 180 + F Sbjct: 2895 DKEVYFA 2901 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 3292 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 3350 Query: 174 GSKAEFR 180 + F Sbjct: 3351 DKEVYFA 3357 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 784 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 842 Query: 174 GSKAEFR 180 + F Sbjct: 843 DKEVYFA 849 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2608 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2666 Query: 174 GSKAEFR 180 + F Sbjct: 2667 DKEVYFA 2673 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1240 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1298 Query: 174 GSKAEFR 180 + F Sbjct: 1299 DKEVYFA 1305 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2228 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2286 Query: 174 GSKAEFR 180 + F Sbjct: 2287 DKEVYFA 2293 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 860 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 918 Query: 174 GSKAEFR 180 + F Sbjct: 919 DKEVYFA 925 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2988 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 3046 Query: 174 GSKAEFR 180 + F Sbjct: 3047 DKEVYFA 3053 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2152 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2210 Query: 174 GSKAEFR 180 + F Sbjct: 2211 DKEVYFA 2217 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2000 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2058 Query: 174 GSKAEFR 180 + F Sbjct: 2059 DKEVYFA 2065 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1924 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1982 Query: 174 GSKAEFR 180 + F Sbjct: 1983 DKEVYFA 1989 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1620 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1678 Query: 174 GSKAEFR 180 + F Sbjct: 1679 DKEVYFA 1685 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 936 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 994 Query: 174 GSKAEFR 180 + F Sbjct: 995 DKEVYFA 1001 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 24 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 82 Query: 174 GSKAEFR 180 + F Sbjct: 83 DKEVYFA 89 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 100 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 158 Query: 174 GSKAEFR 180 + F Sbjct: 159 DKEVYFA 165 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1848 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1906 Query: 174 GSKAEFR 180 + F Sbjct: 1907 DKEVYFA 1913 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 3444 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 3502 Query: 174 GSKAEFR 180 + F Sbjct: 3503 DKEVYFA 3509 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 404 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 462 Query: 174 GSKAEFR 180 + F Sbjct: 463 DKEVYFA 469 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 3140 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 3198 Query: 174 GSKAEFR 180 + F Sbjct: 3199 DKEVYFA 3205 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1392 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1450 Query: 174 GSKAEFR 180 + F Sbjct: 1451 DKEVYFA 1457 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 2760 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 2818 Query: 174 GSKAEFR 180 + F Sbjct: 2819 DKEVYFA 2825 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1468 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1526 Query: 174 GSKAEFR 180 + F Sbjct: 1527 DKEVYFA 1533 Score = 32.9 bits (75), Expect = 0.50 Identities = 16/67 (23%), Positives = 21/67 (30%), Gaps = 5/67 (7%) Query: 118 EIQLAYCPKCQRFLPD---RYVEGICPYCGAL-ARGDECDQGCGRHLEPGEIKEPRCKIC 173 C KC + L EG PYC +G GR +P+C C Sbjct: 1316 HRPCLKCEKCGKTLTSGGHAEHEGK-PYCNHPCYSAMFGPKGFGRGGAESHTFKPKCPKC 1374 Query: 174 GSKAEFR 180 + F Sbjct: 1375 DKEVYFA 1381 >/seq/databases/pdb/scratch/pdb1ezv.ent Chain A Length = 430 Score = 29.1 bits (65), Expect = 7.4 Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 3/46 (6%) Query: 67 LVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEKG 112 ++D +K ++ L I T+ + + +L E G Sbjct: 312 MIDDLIHFTLKQWNRLTISVT---DTEVERAKSLLKLQLGQLYESG 354 Database: /disc9/DB/blast/pdb Posted date: Jan 23, 2002 12:37 PM Number of letters in database: 9,163,132 Number of sequences in database: 30,673 Lambda K H 0.312 0.169 0.476 Lambda K H 0.267 0.0516 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27488985 Number of Sequences: 30673 Number of extensions: 1688811 Number of successful extensions: 6402 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 5959 Number of HSP's gapped (non-prelim): 222 length of query: 539 length of database: 9,163,132 effective HSP length: 45 effective length of query: 494 effective length of database: 7,782,847 effective search space: 3844726418 effective search space used: 3844726418 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 63 (28.5 bits)