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| Information on 1rkd_*_271 |
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Loop code: 1rkd_*_271 PDB: 1rkd Chain: * Type: HH alpha-alpha |
Loop Start: 271 Loop Length: 11 Sec Struct Nt length: 16 Sec Struct Ct length: 9 Structure geometry
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| Sequence: | LPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLD |
| Sec Struct: | HHHHHHHHHHHHHHHHTSSSSGGG---HHHHHHHHH |
| PDB ligands within a cut-off distance of 6 Å in this loop |
| Ligands | Residue | atSS | atLOOP |
| ADPADENOSINE-5'-DIPHOSPHATE | A - 278 | 1 | 0 |
| ADPADENOSINE-5'-DIPHOSPHATE | H - 279 | 1 | 0 |
| ADPADENOSINE-5'-DIPHOSPHATE | A - 280 | 1 | 0 |
| ADPADENOSINE-5'-DIPHOSPHATE | A - 282 | 1 | 0 |
| ADPADENOSINE-5'-DIPHOSPHATE | A - 283 | 1 | 0 |
| ADPADENOSINE-5'-DIPHOSPHATE | V - 286 | 0 | 1 |
| RIBRIBOSE | A - 291 | 0 | 1 |
| RIBRIBOSE | Q - 292 | 0 | 1 |
| PDB Site Annotation |
| Site | Residue | atSS | atLOOP |
| AB1 - RESIDUES MAKING DIRECT HYDROGEN BONDS WITH ADP. | A - 280 | 1 | 0 |
| AB2 - RESIDUES MAKING WATER-MEDIATED HYDROGEN BONDS WITH ADP. | A - 280 | 1 | 0 |
| AB3 - RESIDUES WITHIN VAN DER WAALS DISTANCE OF ADP. | A - 282 | 1 | 0 |
| AB3 - RESIDUES WITHIN VAN DER WAALS DISTANCE OF ADP. | V - 286 | 0 | 1 |
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