ArchDB - Biological DataBase of Protein Loops

Information on 1bif_*_39

Loop code: 1bif_*_39
PDB: 1bif
Chain: *
Type: EH beta-alpha

Loop Start: 39 Loop Length: 6
Sec Struct Nt length: 6 Sec Struct Ct length: 14
Structure geometry

d (Å): 8.892200

delta (°): 85.352097

theta (°): 154.511703

rho (°): 31.823799

Sequence:	TLIVMVGLPARGKTYISKKLTRYLNF
Sec Struct:	EEEEEE--TTSSHHHHHHHHHHHHHH

PDB ligands within a cut-off distance of 6 Å in this loop

Ligands	Residue	atSS	atLOOP
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	G - 45	0	1
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	L - 46	0	1
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	P - 47	0	1
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	A - 48	0	1
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	R - 49	0	1
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	G - 50	0	1
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	K - 51	0	1
MGMAGNESIUM ION	K - 51	0	1
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	T - 52	1	0
MGMAGNESIUM ION	T - 52	1	0
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	Y - 53	1	0
ATGPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER	I - 54	1	0

PDB Site Annotation

Site	Residue	atSS	atLOOP
S1WALKER-A MOTIF (GXXGXGKT), PART OF THE CLASSICAL MONONUCLEOTIDE BINDING MOTIF.	G - 45	0	1
S1WALKER-A MOTIF (GXXGXGKT), PART OF THE CLASSICAL MONONUCLEOTIDE BINDING MOTIF.	L - 46	0	1
S1WALKER-A MOTIF (GXXGXGKT), PART OF THE CLASSICAL MONONUCLEOTIDE BINDING MOTIF.	P - 47	0	1
S1WALKER-A MOTIF (GXXGXGKT), PART OF THE CLASSICAL MONONUCLEOTIDE BINDING MOTIF.	A - 48	0	1
S1WALKER-A MOTIF (GXXGXGKT), PART OF THE CLASSICAL MONONUCLEOTIDE BINDING MOTIF.	R - 49	0	1
S1WALKER-A MOTIF (GXXGXGKT), PART OF THE CLASSICAL MONONUCLEOTIDE BINDING MOTIF.	G - 50	0	1
S1WALKER-A MOTIF (GXXGXGKT), PART OF THE CLASSICAL MONONUCLEOTIDE BINDING MOTIF.	K - 51	0	1
S1WALKER-A MOTIF (GXXGXGKT), PART OF THE CLASSICAL MONONUCLEOTIDE BINDING MOTIF.	T - 52	1	0

Associated ArchDB40 Subclass to 1bif_*_39

Associated ArchDB95 Subclass to 1bif_*_39

Associated ArchDB-EC Subclass to 1bif_*_39