ArchDB - Biological DataBase of Protein Loops

Information on 1byf_A_96

Loop code: 1byf_A_96
PDB: 1byf
Chain: A
Type: HA beta-beta hairpin

Loop Start: 96 Loop Length: 4
Sec Struct Nt length: 5 Sec Struct Ct length: 5
Structure geometry

d (Å): 5.011400

delta (°): 91.747704

theta (°): 129.070999

rho (°): 309.929993

Sequence:	CVQIWSKYNLLDDV
Sec Struct:	EEEEETTTTEEEEE

PDB ligands within a cut-off distance of 6 Å in this loop

Ligands	Residue	atSS	atLOOP
ACTACETATE ION	Q - 98	1	0
GOLGLYCEROL	Q - 98	1	0
ZNZINC ION	Q - 98	1	0
ACTACETATE ION	W - 100	0	1
CACALCIUM ION	W - 100	0	1
GOLGLYCEROL	W - 100	0	1
ZNZINC ION	W - 100	0	1
ACTACETATE ION	S - 101	0	1
ZNZINC ION	S - 101	0	1
OC6CALCIUM ION, 6 WATERS COORDINATED	L - 105	0	1
ACTACETATE ION	D - 107	1	0
CACALCIUM ION	D - 107	1	0
GOLGLYCEROL	D - 107	1	0
CACALCIUM ION	D - 108	1	0
GOLGLYCEROL	D - 108	1	0
ACTACETATE ION	V - 109	1	0
CACALCIUM ION	V - 109	1	0
GOLGLYCEROL	V - 109	1	0

PDB Site Annotation

Site	Residue	atSS	atLOOP
CAACARBOHYDRATE BINDING CALCIUM SITE	D - 107	1	0
CAACARBOHYDRATE BINDING CALCIUM SITE	D - 108	1	0

Associated ArchDB40 Subclass to 1byf_A_96

Associated ArchDB95 Subclass to 1byf_A_96