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PDB code:

Information on 1gzq_A_60

Loop code: 1gzq_A_60 PDB: 1gzq Chain: A Type: HE alpha-beta

Loop Start: 60  Loop Length: 9 Sec Struct Nt length: 25  Sec Struct Ct length: 11 Structure geometry d (Å): 15.461100 delta (°): 103.131401 theta (°): 136.259903 rho (°): 335.434204

Sequence:	DKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGCEL
Sec Struct:	HHHHHHHHHHHHHHHHHHHHHHHHHTTTTT--SSEEEEEEEEEEE

PDB ligands within a cut-off distance of 6 Å in this loop

Ligands	Residue	atSS	atLOOP
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	V - 63	1	0
TWTDOCOSANE	V - 63	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	L - 66	1	0
TWTDOCOSANE	L - 66	1	0
TWTDOCOSANE	E - 67	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	E - 68	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	I - 69	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	F - 70	1	0
TWTDOCOSANE	F - 70	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	V - 72	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	Y - 73	1	0
TWTDOCOSANE	Y - 73	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	I - 74	1	0
TWTDOCOSANE	I - 74	1	0
D12DODECANE	G - 76	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	G - 76	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	F - 77	1	0
TWTDOCOSANE	F - 77	1	0
D12DODECANE	E - 80	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	E - 80	1	0
D12DODECANE	V - 81	1	0
TWTDOCOSANE	V - 81	1	0
D12DODECANE	F - 84	0	1
D12DODECANE	A - 85	0	1
D12DODECANE	F - 88	0	1
D12DODECANE	M - 90	0	1
TWTDOCOSANE	M - 90	0	1
D12DODECANE	F - 94	0	1
D12DODECANE	I - 96	1	0
TWTDOCOSANE	I - 96	1	0
TWTDOCOSANE	Q - 97	1	0
TWTDOCOSANE	G - 98	1	0
TWTDOCOSANE	I - 99	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	A - 100	1	0
TWTDOCOSANE	A - 100	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	G - 101	1	0
PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE	C - 102	1	0

PDB Site Annotation

Site	Residue	atSS	atLOOP
AC6 - TWT BINDING SITE FOR CHAIN A	F - 70	1	0
AC5 - D12 BINDING SITE FOR CHAIN A	E - 80	1	0
AC5 - D12 BINDING SITE FOR CHAIN A	F - 84	0	1
AC5 - D12 BINDING SITE FOR CHAIN A	M - 90	0	1

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