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Information on 1afv
PDB: 1afv
Compound: human immunodeficiency virus type 1 capsid protein
Classification: COMPLEX (VIRAL CAPSID/IMMUNOGLOBULIN)
Entry date in PDB: 1997-08-20
Resolution [Å]: 3.70
R-Factor: 0.217


CHAIN: A
SWISS-PROT/TREMBL: P12493
   KEYWORD: 3D-structure    AIDS    Core protein    Lipoprotein    Myristate    Phosphorylation    Polyprotein    Repeat    Zinc-finger   
SCOP: a.73.1.1 All alpha proteins    Retrovirus capsid protein, N-terminal core domain    Retrovirus capsid protein, N-terminal core domain    Retrovirus capsid protein, N-terminal core domain    HIV-1 capsid protein    Human immunodeficiency virus type 1
GO:  nucleic acid binding    structural molecule activity    viral life cycle   


CHAIN: B
SWISS-PROT/TREMBL: P12493
   KEYWORD: 3D-structure    AIDS    Core protein    Lipoprotein    Myristate    Phosphorylation    Polyprotein    Repeat    Zinc-finger   
SCOP: a.73.1.1 All alpha proteins    Retrovirus capsid protein, N-terminal core domain    Retrovirus capsid protein, N-terminal core domain    Retrovirus capsid protein, N-terminal core domain    HIV-1 capsid protein    Human immunodeficiency virus type 1
GO:  nucleic acid binding    structural molecule activity    viral life cycle   
1afv Image
Image Source: PDB
Homologous structures to 1afv classified in ArchDB

12e8 H - percentage of sequence identity: 78
1a0q L - percentage of sequence identity: 74
1a14 H - percentage of sequence identity: 68
1a3r L - percentage of sequence identity: 78
1a6w H - percentage of sequence identity: 80
1ad0 A - percentage of sequence identity: 60
1axt L - percentage of sequence identity: 80
1ay1 H - percentage of sequence identity: 66
1bm3 L - percentage of sequence identity: 77
1c1e L - percentage of sequence identity: 77
1c5c H - percentage of sequence identity: 68
1c5d A - percentage of sequence identity: 65
1cic B - percentage of sequence identity: 83
1clo L - percentage of sequence identity: 78
1cr9 L - percentage of sequence identity: 74
1ct8 B - percentage of sequence identity: 80
1dlf L - percentage of sequence identity: 61
1dqd L - percentage of sequence identity: 80
1dqq B - percentage of sequence identity: 62
1dvf D - percentage of sequence identity: 63
1dzb A - percentage of sequence identity: 67
1e4w H - percentage of sequence identity: 82
1e6o H - percentage of sequence identity: 86
1eap B - percentage of sequence identity: 75
1eeq A - percentage of sequence identity: 64
1ejo H - percentage of sequence identity: 63
1ek3 A - percentage of sequence identity: 61
1emt L - percentage of sequence identity: 78
1f3d H - percentage of sequence identity: 81
1f4x H - percentage of sequence identity: 71
1f58 L - percentage of sequence identity: 90
1f8t L - percentage of sequence identity: 75
1fe8 L - percentage of sequence identity: 78
1fgn H - percentage of sequence identity: 82
1fgv L - percentage of sequence identity: 61
1flr H - percentage of sequence identity: 63
1fns L - percentage of sequence identity: 78
1gig H - percentage of sequence identity: 69
1gpo L - percentage of sequence identity: 77
1h0d A - percentage of sequence identity: 95
1h8n A - percentage of sequence identity: 74
1hil A - percentage of sequence identity: 78
1hyx H - percentage of sequence identity: 67
1i7z A - percentage of sequence identity: 68
1igj B - percentage of sequence identity: 73
1ikf H - percentage of sequence identity: 65
1il1 B - percentage of sequence identity: 76
1ind H - percentage of sequence identity: 65
1iqw L - percentage of sequence identity: 90
1j05 B - percentage of sequence identity: 64
1jfq L - percentage of sequence identity: 79
1jgl H - percentage of sequence identity: 71
1jgu H - percentage of sequence identity: 61
1jv5 B - percentage of sequence identity: 76
1k6q H - percentage of sequence identity: 81
1kb5 H - percentage of sequence identity: 76
1kcu L - percentage of sequence identity: 77
1kcv L - percentage of sequence identity: 70
1keg H - percentage of sequence identity: 77
1kel H - percentage of sequence identity: 71
1l7t H - percentage of sequence identity: 70
1lk3 L - percentage of sequence identity: 75
1lo0 L - percentage of sequence identity: 77
1lo4 H - percentage of sequence identity: 60
1m9f C - percentage of sequence identity: 98
1m9y D - percentage of sequence identity: 98
1mam L - percentage of sequence identity: 78
1mex L - percentage of sequence identity: 76
1mfa - - percentage of sequence identity: 68
1mie H - percentage of sequence identity: 80
1mj8 H - percentage of sequence identity: 79
1mju L - percentage of sequence identity: 77
1mlb B - percentage of sequence identity: 82
1mre H - percentage of sequence identity: 82
1mvu B - percentage of sequence identity: 63
1nbv H - percentage of sequence identity: 61
1ncb H - percentage of sequence identity: 67
1ncw L - percentage of sequence identity: 76
1ndg B - percentage of sequence identity: 60
1ndm B - percentage of sequence identity: 63
1nlb H - percentage of sequence identity: 72
1nqb A - percentage of sequence identity: 61
1oar I - percentage of sequence identity: 80
1ors A - percentage of sequence identity: 79
1p2c A - percentage of sequence identity: 76
1p7k B - percentage of sequence identity: 84
1pz5 A - percentage of sequence identity: 79
1q0y H - percentage of sequence identity: 75
1q9r A - percentage of sequence identity: 77
1q9w B - percentage of sequence identity: 69
1qkz H - percentage of sequence identity: 63
1qok A - percentage of sequence identity: 65
1r3j A - percentage of sequence identity: 77
1rih L - percentage of sequence identity: 78
1rur H - percentage of sequence identity: 81
1rz8 A - percentage of sequence identity: 60
1sbs L - percentage of sequence identity: 77
1sm3 H - percentage of sequence identity: 68
1tet L - percentage of sequence identity: 77
1ub5 A - percentage of sequence identity: 61
1ub6 B - percentage of sequence identity: 78
1vge H - percentage of sequence identity: 63
1wej H - percentage of sequence identity: 79
1wtl A - percentage of sequence identity: 60
1yee H - percentage of sequence identity: 74
1yei H - percentage of sequence identity: 76
2cgr H - percentage of sequence identity: 75
2ck0 L - percentage of sequence identity: 76
2h1p H - percentage of sequence identity: 71
2hrp H - percentage of sequence identity: 70
2imn - - percentage of sequence identity: 62
2jel H - percentage of sequence identity: 77
2pcp B - percentage of sequence identity: 82
35c8 H - percentage of sequence identity: 81