PDB: 1bco Compound: bacteriophage mu transposase Classification: TRANSPOSASE Entry date in PDB: 1995-10-15 Resolution [Å]: 2.40 R-Factor: 0.196

CHAIN: - SWISS-PROT/TREMBL: P07636    KEYWORD: 3D-structure    DNA excision    DNA integration    DNA recombination    DNA-binding    Transposable element    Transposition    SCOP: b.48.1.1 All beta proteins    mu transposase, C-terminal domain    mu transposase, C-terminal domain    mu transposase, C-terminal domain    mu transposase, C-terminal domain    Bacteriophage mu SCOP: c.55.3.3 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    mu transposase, core domain    mu transposase, core domain    Bacteriophage mu GO:  DNA binding    transposase activity    DNA integration    DNA transposition    regulation of transcription

Image Source: PDB

Loops in ArchDB40 clusters

1bco_*_277 - HA => SUBCLASS : 3.1.1
1bco_*_288 - HA => SUBCLASS : 4.1.2
1bco_*_543 - HA => SUBCLASS : 5.1.1
1bco_*_543 - HA => SUBCLASS : 5.1.3
1bco_*_300 - EH => SUBCLASS : 4.11.4
1bco_*_300 - EH => SUBCLASS : 4.11.10
1bco_*_265 - AR => SUBCLASS : 2.1.2
1bco_*_265 - AR => SUBCLASS : 4.5.1
1bco_*_495 - AR => SUBCLASS : 5.7.1

Loops in ArchDB95 clusters

1bco_*_300 - EH => SUBCLASS : 4.4.9
1bco_*_300 - EH => SUBCLASS : 4.8.6
1bco_*_265 - AR => SUBCLASS : 3.1.6
1bco_*_265 - AR => SUBCLASS : 4.3.2
1bco_*_495 - AR => SUBCLASS : 5.8.1
1bco_*_277 - HA => SUBCLASS : 3.1.1
1bco_*_288 - HA => SUBCLASS : 4.1.2
1bco_*_543 - HA => SUBCLASS : 5.1.5

Loops not clustered in ArchDB

1bco_*_284 - AR
1bco_*_327 - AR
1bco_*_373 - AR
1bco_*_490 - AR
1bco_*_514 - AR
1bco_*_477 - EH
1bco_*_431 - EH
1bco_*_332 - EH
1bco_*_530 - HA
1bco_*_502 - HA
1bco_*_311 - HE
1bco_*_363 - HE
1bco_*_464 - HE
1bco_*_482 - HE
1bco_*_433 - HH

1bcm A - percentage of sequence identity: 100
1bcm B - percentage of sequence identity: 100