PDB: 1bf4 Compound: sso7d Classification: COMPLEX (DNA-BINDING PROTEIN/DNA) Entry date in PDB: 1999-06-08 Resolution [Å]: 1.60 R-Factor: 0.211

CHAIN: A SWISS-PROT/TREMBL: P13123    KEYWORD: 3D-structure    DNA-binding    Methylation    SCOP: b.34.13.1 All beta proteins    SH3-like barrel    Chromo domain-like    "Histone-like" proteins from archaea    DNA-binding protein    Archaeon Sulfolobus solfataricus, Sso7d GO:  DNA binding    endoribonuclease activity

Image Source: PDB

Loops in ArchDB95 clusters

1bf4_A_11 - AR => SUBCLASS : 3.2.7
1bf4_A_3 - HA => SUBCLASS : 2.1.1
1bf4_A_20 - HA => SUBCLASS : 2.3.1
1bf4_A_29 - HA => SUBCLASS : 3.2.1

Loops not clustered in ArchDB

1bf4_A_41 - EH

1azq A - percentage of sequence identity: 81
1b4o - - percentage of sequence identity: 96
1bbx C - percentage of sequence identity: 98
1bbx D - percentage of sequence identity: 98
1bnz A - percentage of sequence identity: 100
1c8c A - percentage of sequence identity: 96
1ca5 A - percentage of sequence identity: 81
1ca6 A - percentage of sequence identity: 81
1jic - - percentage of sequence identity: 98
1r83 A - percentage of sequence identity: 96
1sap - - percentage of sequence identity: 81
1sso - - percentage of sequence identity: 98
1wd0 A - percentage of sequence identity: 81
1wd1 A - percentage of sequence identity: 81
1wto A - percentage of sequence identity: 78
1wtp A - percentage of sequence identity: 80
1wtp B - percentage of sequence identity: 80
1wtq A - percentage of sequence identity: 80
1wtr A - percentage of sequence identity: 80
1wtv A - percentage of sequence identity: 80
1wtw A - percentage of sequence identity: 80
1wtx A - percentage of sequence identity: 80
1wvl A - percentage of sequence identity: 81
1wvl B - percentage of sequence identity: 81
1xx8 A - percentage of sequence identity: 80
1xyi A - percentage of sequence identity: 78