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Information on 1bkb
PDB: 1bkb
Compound: translation initiation factor 5a
Classification: TRANSLATION
Entry date in PDB: 1998-11-04
Resolution [Å]: 1.75
R-Factor: 0.214


CHAIN: -
SWISS-PROT/TREMBL: P56635
   KEYWORD: 3D-structure    Complete proteome    Hypusine    Initiation factor    Protein biosynthesis   
SCOP: b.34.5.2 All beta proteins    SH3-like barrel    Translation proteins SH3-like domain    eIF5a N-terminal domain-like    Eukaryotic initiation translation factor 5a (eIF5a)    Archaeon Pyrobaculum aerophilum
SCOP: b.40.4.5 All beta proteins    OB-fold    Nucleic acid-binding proteins    Cold shock DNA-binding domain-like    C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a)    Archaeon Pyrobaculum aerophilum
GO:  translation initiation factor activity    translational initiation   
1bkb Image
Image Source: PDB

Stored Loops of 1bkb

Loops in ArchDB40 clusters

1bkb_*_122 - HA => SUBCLASS : 2.3.1
1bkb_*_47 - HA => SUBCLASS : 4.1.2
1bkb_*_77 - AR => SUBCLASS : 2.1.3
1bkb_*_60 - AR => SUBCLASS : 3.7.2
1bkb_*_10 - AR => SUBCLASS : 8.5.1

Loops in ArchDB95 clusters

1bkb_*_77 - AR => SUBCLASS : 2.1.1
1bkb_*_60 - AR => SUBCLASS : 2.2.1
1bkb_*_10 - AR => SUBCLASS : 8.9.1
1bkb_*_85 - HA => SUBCLASS : 2.2.8
1bkb_*_122 - HA => SUBCLASS : 2.3.1
1bkb_*_47 - HA => SUBCLASS : 4.1.2

Loops not clustered in ArchDB

1bkb_*_70 - AR
1bkb_*_91 - AR
1bkb_*_103 - EH
1bkb_*_22 - HA
1bkb_*_28 - HA
1bkb_*_111 - HE

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