PDB: 1bl0 Compound: DNA (5'- d(GpGpGpGpApTpTpTpApGpCpApApApApCpGpTpGp Classification: TRANSCRIPTION/DNA Entry date in PDB: 1998-09-02 Resolution [Å]: 2.30 R-Factor: 0.225

CHAIN: A SWISS-PROT/TREMBL: P27246    KEYWORD: 3D-structure    Activator    Antibiotic resistance    Complete proteome    DNA-binding    Transcription regulation    SCOP: a.4.1.8 All alpha proteins    DNA/RNA-binding 3-helical bundle    Homeodomain-like    AraC type transcriptional activator    MarA    Escherichia coli SCOP: a.4.1.8 All alpha proteins    DNA/RNA-binding 3-helical bundle    Homeodomain-like    AraC type transcriptional activator    MarA    Escherichia coli GO:  intracellular    intracellular    intracellular    DNA binding    DNA binding    DNA binding    transcription factor activity    transcription factor activity    transcription factor activity    regulation of transcription    regulation of transcription    regulation of transcription    regulation of transcription, DNA-dependent    regulation of transcription, DNA-dependent    regulation of transcription, DNA-dependent

Image Source: PDB

Loops in ArchDB40 clusters

1bl0_A_91 - HH => SUBCLASS : 3.1.2
1bl0_A_41 - HH => SUBCLASS : 3.1.2
1bl0_A_79 - HH => SUBCLASS : 4.30.1

Loops in ArchDB95 clusters

1bl0_A_41 - HH => SUBCLASS : 3.4.1
1bl0_A_91 - HH => SUBCLASS : 3.4.2
1bl0_A_79 - HH => SUBCLASS : 4.10.1

Loops not clustered in ArchDB

1bl0_A_10 - HH
1bl0_A_31 - HH
1bl0_A_56 - HH

1xs9 A - percentage of sequence identity: 100