PDB: 1c0a Compound: aspartyl trna synthetase Classification: LIGASE/RNA Entry date in PDB: 1999-11-23 Resolution [Å]: 2.40 R-Factor: 0.208

CHAIN: A SWISS-PROT/TREMBL: P21889    KEYWORD: 3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Complete proteome    Ligase    Protein biosynthesis    3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Complete proteome    Ligase    Protein biosynthesis    EC: 6.1.1.12 SCOP: b.40.4.1 All beta proteins    OB-fold    Nucleic acid-binding proteins    Anticodon-binding domain    Aspartyl-tRNA synthetase (AspRS)    Escherichia coli SCOP: d.74.4.1 Alpha and beta proteins (a+b)    DCoH-like    Prokaryotic AspRS, insert domain    Prokaryotic AspRS, insert domain    Prokaryotic AspRS, insert domain    Escherichia coli SCOP: d.104.1.1 Alpha and beta proteins (a+b)    Class II aaRS and biotin synthetases    Class II aaRS and biotin synthetases    Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain    Aspartyl-tRNA synthetase (AspRS)    Escherichia coli SCOP: d.104.1.1 Alpha and beta proteins (a+b)    Class II aaRS and biotin synthetases    Class II aaRS and biotin synthetases    Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain    Aspartyl-tRNA synthetase (AspRS)    Escherichia coli GO:  cytoplasm    aspartate-tRNA ligase activity    ATP binding    nucleic acid binding    tRNA ligase activity    aspartyl-tRNA aminoacylation    protein biosynthesis    tRNA aminoacylation for protein translation

Image Source: PDB

Loops in ArchDB40 clusters

1c0a_A_132 - HE => SUBCLASS : 1.1.1
1c0a_A_132 - HE => SUBCLASS : 2.1.2
1c0a_A_132 - HE => SUBCLASS : 2.2.3
1c0a_A_305 - HE => SUBCLASS : 3.3.2
1c0a_A_195 - HE => SUBCLASS : 3.6.2
1c0a_A_331 - HE => SUBCLASS : 3.6.5
1c0a_A_436 - HA => SUBCLASS : 4.7.1
1c0a_A_177 - HA => SUBCLASS : 6.5.1
1c0a_A_43 - EH => SUBCLASS : 0.1.42
1c0a_A_228 - EH => SUBCLASS : 3.4.1
1c0a_A_481 - EH => SUBCLASS : 4.12.1
1c0a_A_316 - EH => SUBCLASS : 7.1.1
1c0a_A_493 - HH => SUBCLASS : 3.3.1
1c0a_A_296 - HH => SUBCLASS : 3.4.1
1c0a_A_296 - HH => SUBCLASS : 3.4.6

Loops in ArchDB95 clusters

1c0a_A_43 - EH => SUBCLASS : 0.1.55
1c0a_A_228 - EH => SUBCLASS : 3.6.1
1c0a_A_481 - EH => SUBCLASS : 4.5.2
1c0a_A_316 - EH => SUBCLASS : 7.1.1
1c0a_A_316 - EH => SUBCLASS : 7.9.1
1c0a_A_493 - HH => SUBCLASS : 3.1.1
1c0a_A_493 - HH => SUBCLASS : 3.2.1
1c0a_A_296 - HH => SUBCLASS : 3.3.10
1c0a_A_296 - HH => SUBCLASS : 3.3.12
1c0a_A_436 - HA => SUBCLASS : 4.9.1
1c0a_A_177 - HA => SUBCLASS : 7.1.1

Loops in ArchDB-EC clusters

1c0a_A_296 - HH => SUBCLASS : 3.4.1

Loops not clustered in ArchDB

1c0a_A_158 - AR
1c0a_A_427 - AR
1c0a_A_158 - AR
1c0a_A_427 - AR
1c0a_A_92 - EH
1c0a_A_528 - EH
1c0a_A_444 - EH
1c0a_A_391 - EH
1c0a_A_364 - EH
1c0a_A_292 - EH
1c0a_A_187 - EH
1c0a_A_269 - EH
1c0a_A_208 - HA
1c0a_A_351 - HA
1c0a_A_473 - HA
1c0a_A_17 - HA
1c0a_A_34 - HA
1c0a_A_68 - HA
1c0a_A_177 - HA
1c0a_A_351 - HA
1c0a_A_436 - HA
1c0a_A_208 - HA
1c0a_A_68 - HA
1c0a_A_473 - HA
1c0a_A_17 - HA
1c0a_A_34 - HA
1c0a_A_459 - HE
1c0a_A_54 - HE
1c0a_A_241 - HE
1c0a_A_272 - HE
1c0a_A_374 - HE
1c0a_A_399 - HE
1c0a_A_507 - HE
1c0a_A_118 - HH
1c0a_A_125 - HH
1c0a_A_535 - HH

1eqr A - percentage of sequence identity: 100
1eqr B - percentage of sequence identity: 100
1eqr C - percentage of sequence identity: 100
1il2 A - percentage of sequence identity: 100
1il2 B - percentage of sequence identity: 100