PDB: 1cb8 Compound: chondroitinase ac Classification: LYASE Entry date in PDB: 1999-05-14 Resolution [Å]: 1.90 R-Factor: 0.195

CHAIN: A SWISS-PROT/TREMBL: Q59288    KEYWORD: 3D-structure    Calcium    Glycoprotein    Lyase    Signal    EC: 4.2.2.5 SCOP: a.102.3.2 All alpha proteins    alpha/alpha toroid    Chondroitin AC/alginate lyase    Hyaluronate lyase-like catalytic, N-terminal domain    Chondroitinase AC    Pedobacter heparinus (Flavobacterium heparinum) SCOP: b.24.1.1 All beta proteins    Hyaluronate lyase-like, C-terminal domain    Hyaluronate lyase-like, C-terminal domain    Hyaluronate lyase-like, C-terminal domain    Chondroitinase AC    Pedobacter heparinus (Flavobacterium heparinum) SCOP: b.30.5.2 All beta proteins    Supersandwich    Galactose mutarotase-like    Hyaluronate lyase-like, central domain    Chondroitinase AC    Pedobacter heparinus (Flavobacterium heparinum) GO:  extracellular region    carbon-oxygen lyase activity, acting on polysaccharides    lyase activity

Image Source: PDB

Loops in ArchDB40 clusters

1cb8_A_258 - HE => SUBCLASS : 0.1.19
1cb8_A_628 - HA => SUBCLASS : 2.1.1
1cb8_A_518 - HA => SUBCLASS : 2.1.1
1cb8_A_445 - HA => SUBCLASS : 2.1.1
1cb8_A_445 - HA => SUBCLASS : 2.1.3
1cb8_A_348 - HA => SUBCLASS : 2.2.1
1cb8_A_456 - HA => SUBCLASS : 2.2.1
1cb8_A_601 - HA => SUBCLASS : 2.2.4
1cb8_A_276 - HA => SUBCLASS : 2.3.1
1cb8_A_497 - HA => SUBCLASS : 2.5.2
1cb8_A_215 - HA => SUBCLASS : 3.1.1
1cb8_A_609 - HA => SUBCLASS : 4.1.1
1cb8_A_339 - HA => SUBCLASS : 4.1.1
1cb8_A_667 - HA => SUBCLASS : 4.1.2
1cb8_A_215 - HA => SUBCLASS : 4.2.1
1cb8_A_356 - HA => SUBCLASS : 22.1.1
1cb8_A_356 - HA => SUBCLASS : 22.1.2
1cb8_A_533 - AR => SUBCLASS : 1.1.15
1cb8_A_502 - AR => SUBCLASS : 3.1.1
1cb8_A_635 - AR => SUBCLASS : 3.2.3
1cb8_A_619 - AR => SUBCLASS : 3.2.5
1cb8_A_502 - AR => SUBCLASS : 3.3.1
1cb8_A_502 - AR => SUBCLASS : 3.5.1
1cb8_A_509 - AR => SUBCLASS : 3.5.1
1cb8_A_173 - HH => SUBCLASS : 2.2.1
1cb8_A_79 - HH => SUBCLASS : 9.4.1

Loops in ArchDB95 clusters

1cb8_A_509 - AR => SUBCLASS : 1.1.1
1cb8_A_502 - AR => SUBCLASS : 1.1.1
1cb8_A_502 - AR => SUBCLASS : 2.3.1
1cb8_A_533 - AR => SUBCLASS : 3.1.7
1cb8_A_619 - AR => SUBCLASS : 3.1.10
1cb8_A_635 - AR => SUBCLASS : 3.1.14
1cb8_A_502 - AR => SUBCLASS : 3.3.1
1cb8_A_302 - HH => SUBCLASS : 1.2.8
1cb8_A_173 - HH => SUBCLASS : 2.2.1
1cb8_A_79 - HH => SUBCLASS : 9.20.1
1cb8_A_258 - HE => SUBCLASS : 0.1.32
1cb8_A_518 - HA => SUBCLASS : 2.1.1
1cb8_A_445 - HA => SUBCLASS : 2.1.1
1cb8_A_628 - HA => SUBCLASS : 2.1.1
1cb8_A_445 - HA => SUBCLASS : 2.1.4
1cb8_A_445 - HA => SUBCLASS : 2.1.5
1cb8_A_348 - HA => SUBCLASS : 2.2.1
1cb8_A_456 - HA => SUBCLASS : 2.2.1
1cb8_A_601 - HA => SUBCLASS : 2.2.12
1cb8_A_601 - HA => SUBCLASS : 2.2.26
1cb8_A_276 - HA => SUBCLASS : 2.3.1
1cb8_A_456 - HA => SUBCLASS : 3.1.1
1cb8_A_215 - HA => SUBCLASS : 3.1.1
1cb8_A_215 - HA => SUBCLASS : 3.1.2
1cb8_A_497 - HA => SUBCLASS : 3.11.1
1cb8_A_339 - HA => SUBCLASS : 4.1.1
1cb8_A_609 - HA => SUBCLASS : 4.1.1
1cb8_A_667 - HA => SUBCLASS : 4.1.2

Loops in ArchDB-EC clusters

1cb8_A_79 - HH => SUBCLASS : 9.14.1

Loops not clustered in ArchDB

1cb8_A_469 - AR
1cb8_A_557 - AR
1cb8_A_655 - AR
1cb8_A_387 - AR
1cb8_A_413 - AR
1cb8_A_533 - AR
1cb8_A_557 - AR
1cb8_A_483 - AR
1cb8_A_525 - AR
1cb8_A_680 - AR
1cb8_A_509 - AR
1cb8_A_502 - AR
1cb8_A_413 - AR
1cb8_A_387 - AR
1cb8_A_680 - AR
1cb8_A_469 - AR
1cb8_A_655 - AR
1cb8_A_619 - AR
1cb8_A_483 - AR
1cb8_A_635 - AR
1cb8_A_525 - AR
1cb8_A_222 - EH
1cb8_A_280 - EH
1cb8_A_576 - EH
1cb8_A_456 - HA
1cb8_A_667 - HA
1cb8_A_643 - HA
1cb8_A_497 - HA
1cb8_A_628 - HA
1cb8_A_609 - HA
1cb8_A_601 - HA
1cb8_A_541 - HA
1cb8_A_518 - HA
1cb8_A_445 - HA
1cb8_A_436 - HA
1cb8_A_209 - HA
1cb8_A_436 - HA
1cb8_A_541 - HA
1cb8_A_643 - HA
1cb8_A_209 - HA
1cb8_A_215 - HA
1cb8_A_276 - HA
1cb8_A_339 - HA
1cb8_A_348 - HA
1cb8_A_356 - HA
1cb8_A_316 - HE
1cb8_A_590 - HE
1cb8_A_193 - HE
1cb8_A_27 - HH
1cb8_A_126 - HH
1cb8_A_103 - HH
1cb8_A_46 - HH
1cb8_A_153 - HH
1cb8_A_234 - HH
1cb8_A_132 - HH

1hm2 A - percentage of sequence identity: 100
1hm3 A - percentage of sequence identity: 100
1hmu A - percentage of sequence identity: 100
1hmw A - percentage of sequence identity: 100