Information on 1cvr |
PDB: 1cvr Compound: gingipain r Classification: HYDROLASE Entry date in PDB: 2000-03-01 Resolution [Å]: 2.00 R-Factor: 0.163 |
CHAIN: A SWISS-PROT/TREMBL:
P95493
KEYWORD: 3D-structure Calcium Complete proteome Hydrolase Signal Thiol protease Virulence Zymogen EC: 3.4.22.37 SCOP: b.1.18.12 All beta proteins Immunoglobulin-like beta-sandwich E set domains Gingipain R (RgpB), C-terminal domain Gingipain R (RgpB), C-terminal domain Porphyromonas gingivalis SCOP: c.17.1.2 Alpha and beta proteins (a/b) Caspase-like Caspase-like Gingipain R (RgpB), N-terminal domain Gingipain R (RgpB), N-terminal domain Porphyromonas gingivalis GO: cysteine-type peptidase activity peptidase activity proteolysis and peptidolysis |
Image Source: PDB |
Stored Loops of 1cvr |
Loops in ArchDB40 clusters
1cvr_A_25 - HE => SUBCLASS : 1.1.1
1cvr_A_163 - HE => SUBCLASS : 3.6.1
1cvr_A_379 - HA => SUBCLASS : 2.4.1
1cvr_A_85 - HA => SUBCLASS : 2.6.1
1cvr_A_412 - HA => SUBCLASS : 5.4.1
1cvr_A_109 - EH => SUBCLASS : 2.1.9
1cvr_A_181 - EH => SUBCLASS : 5.5.3
1cvr_A_274 - EH => SUBCLASS : 5.12.2
1cvr_A_356 - AR => SUBCLASS : 2.1.4
1cvr_A_361 - AR => SUBCLASS : 4.7.2
1cvr_A_368 - AR => SUBCLASS : 4.28.1
1cvr_A_368 - AR => SUBCLASS : 5.22.1
Loops in ArchDB95 clusters
1cvr_A_37 - EH => SUBCLASS : 0.1.8
1cvr_A_37 - EH => SUBCLASS : 0.1.74
1cvr_A_109 - EH => SUBCLASS : 4.3.1
1cvr_A_181 - EH => SUBCLASS : 5.20.1
1cvr_A_274 - EH => SUBCLASS : 5.29.1
1cvr_A_356 - AR => SUBCLASS : 2.1.2
1cvr_A_356 - AR => SUBCLASS : 2.1.9
1cvr_A_361 - AR => SUBCLASS : 4.7.2
1cvr_A_368 - AR => SUBCLASS : 4.27.1
1cvr_A_387 - AR => SUBCLASS : 4.31.1
1cvr_A_361 - AR => SUBCLASS : 5.2.4
1cvr_A_25 - HE => SUBCLASS : 1.1.1
1cvr_A_256 - HE => SUBCLASS : 1.4.1
1cvr_A_163 - HE => SUBCLASS : 3.1.1
1cvr_A_379 - HA => SUBCLASS : 2.1.2
1cvr_A_85 - HA => SUBCLASS : 2.4.1
1cvr_A_412 - HA => SUBCLASS : 5.3.1
Loops in ArchDB-EC clusters
1cvr_A_163 - HE => SUBCLASS : 3.1.3
Loops not clustered in ArchDB
1cvr_A_398 - AR
1cvr_A_268 - AR
1cvr_A_70 - AR
1cvr_A_90 - AR
1cvr_A_70 - AR
1cvr_A_90 - AR
1cvr_A_268 - AR
1cvr_A_335 - AR
1cvr_A_356 - AR
1cvr_A_361 - AR
1cvr_A_368 - AR
1cvr_A_387 - AR
1cvr_A_398 - AR
1cvr_A_335 - AR
1cvr_A_11 - EH
1cvr_A_144 - EH
1cvr_A_238 - EH
1cvr_A_264 - HA
1cvr_A_379 - HA
1cvr_A_412 - HA
1cvr_A_264 - HA
1cvr_A_205 - HA
1cvr_A_85 - HA
1cvr_A_205 - HA
1cvr_A_192 - HE
1cvr_A_118 - HE
1cvr_A_52 - HE
1cvr_A_310 - HE
1cvr_A_43 - HH
1cvr_A_286 - HH