Logo
Information on 1cvr
PDB: 1cvr
Compound: gingipain r
Classification: HYDROLASE
Entry date in PDB: 2000-03-01
Resolution [Å]: 2.00
R-Factor: 0.163


CHAIN: A
SWISS-PROT/TREMBL: P95493
   KEYWORD: 3D-structure    Calcium    Complete proteome    Hydrolase    Signal    Thiol protease    Virulence    Zymogen   
EC: 3.4.22.37
SCOP: b.1.18.12 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    Gingipain R (RgpB), C-terminal domain    Gingipain R (RgpB), C-terminal domain    Porphyromonas gingivalis
SCOP: c.17.1.2 Alpha and beta proteins (a/b)    Caspase-like    Caspase-like    Gingipain R (RgpB), N-terminal domain    Gingipain R (RgpB), N-terminal domain    Porphyromonas gingivalis
GO:  cysteine-type peptidase activity    peptidase activity    proteolysis and peptidolysis   
1cvr Image
Image Source: PDB

Stored Loops of 1cvr

Loops in ArchDB40 clusters

1cvr_A_25 - HE => SUBCLASS : 1.1.1
1cvr_A_163 - HE => SUBCLASS : 3.6.1
1cvr_A_379 - HA => SUBCLASS : 2.4.1
1cvr_A_85 - HA => SUBCLASS : 2.6.1
1cvr_A_412 - HA => SUBCLASS : 5.4.1
1cvr_A_109 - EH => SUBCLASS : 2.1.9
1cvr_A_181 - EH => SUBCLASS : 5.5.3
1cvr_A_274 - EH => SUBCLASS : 5.12.2
1cvr_A_356 - AR => SUBCLASS : 2.1.4
1cvr_A_361 - AR => SUBCLASS : 4.7.2
1cvr_A_368 - AR => SUBCLASS : 4.28.1
1cvr_A_368 - AR => SUBCLASS : 5.22.1

Loops in ArchDB95 clusters

1cvr_A_37 - EH => SUBCLASS : 0.1.8
1cvr_A_37 - EH => SUBCLASS : 0.1.74
1cvr_A_109 - EH => SUBCLASS : 4.3.1
1cvr_A_181 - EH => SUBCLASS : 5.20.1
1cvr_A_274 - EH => SUBCLASS : 5.29.1
1cvr_A_356 - AR => SUBCLASS : 2.1.2
1cvr_A_356 - AR => SUBCLASS : 2.1.9
1cvr_A_361 - AR => SUBCLASS : 4.7.2
1cvr_A_368 - AR => SUBCLASS : 4.27.1
1cvr_A_387 - AR => SUBCLASS : 4.31.1
1cvr_A_361 - AR => SUBCLASS : 5.2.4
1cvr_A_25 - HE => SUBCLASS : 1.1.1
1cvr_A_256 - HE => SUBCLASS : 1.4.1
1cvr_A_163 - HE => SUBCLASS : 3.1.1
1cvr_A_379 - HA => SUBCLASS : 2.1.2
1cvr_A_85 - HA => SUBCLASS : 2.4.1
1cvr_A_412 - HA => SUBCLASS : 5.3.1

Loops in ArchDB-EC clusters

1cvr_A_163 - HE => SUBCLASS : 3.1.3

Loops not clustered in ArchDB

1cvr_A_398 - AR
1cvr_A_268 - AR
1cvr_A_70 - AR
1cvr_A_90 - AR
1cvr_A_70 - AR
1cvr_A_90 - AR
1cvr_A_268 - AR
1cvr_A_335 - AR
1cvr_A_356 - AR
1cvr_A_361 - AR
1cvr_A_368 - AR
1cvr_A_387 - AR
1cvr_A_398 - AR
1cvr_A_335 - AR
1cvr_A_11 - EH
1cvr_A_144 - EH
1cvr_A_238 - EH
1cvr_A_264 - HA
1cvr_A_379 - HA
1cvr_A_412 - HA
1cvr_A_264 - HA
1cvr_A_205 - HA
1cvr_A_85 - HA
1cvr_A_205 - HA
1cvr_A_192 - HE
1cvr_A_118 - HE
1cvr_A_52 - HE
1cvr_A_310 - HE
1cvr_A_43 - HH
1cvr_A_286 - HH

PDB Code you typed not referenced in our DB or maybe mistyped.