PDB: 1dkz Compound: substrate binding domain of dnak Classification: COMPLEX (MOLECULAR CHAPERONE/PEPTIDE) Entry date in PDB: 1996-12-07 Resolution [Å]: 2.00 R-Factor: 0.193

CHAIN: A SWISS-PROT/TREMBL: P04475    KEYWORD: 3D-structure    ATP-binding    Chaperone    Complete proteome    DNA replication    Heat shock    Phosphorylation    SCOP: a.8.4.1 All alpha proteins    immunoglobulin/albumin-binding domain-like    Heat shock protein 70kD (HSP70), C-terminal subdomain    Heat shock protein 70kD (HSP70), C-terminal subdomain    DnaK    Escherichia coli SCOP: b.130.1.1 All beta proteins    Heat shock protein 70kD (HSP70), peptide-binding domain    Heat shock protein 70kD (HSP70), peptide-binding domain    Heat shock protein 70kD (HSP70), peptide-binding domain    DnaK    Escherichia coli GO:

Image Source: PDB

Loops in ArchDB40 clusters

1dkz_A_399 - HA => SUBCLASS : 2.1.1
1dkz_A_472 - HA => SUBCLASS : 3.1.1
1dkz_A_484 - HA => SUBCLASS : 4.1.2
1dkz_A_559 - HH => SUBCLASS : 3.4.2

Loops in ArchDB95 clusters

1dkz_A_559 - HH => SUBCLASS : 3.3.2
1dkz_A_399 - HA => SUBCLASS : 2.1.1
1dkz_A_472 - HA => SUBCLASS : 3.1.1
1dkz_A_399 - HA => SUBCLASS : 3.2.1
1dkz_A_484 - HA => SUBCLASS : 4.1.2

Loops not clustered in ArchDB

1dkz_A_407 - AR
1dkz_A_420 - AR
1dkz_A_452 - AR
1dkz_A_496 - EH
1dkz_A_435 - HA
1dkz_A_509 - HH
1dkz_A_523 - HH
1dkz_A_581 - HH

1bpr - - percentage of sequence identity: 99
1ckr A - percentage of sequence identity: 60
1dg4 A - percentage of sequence identity: 99
1dkx A - percentage of sequence identity: 99
1dky A - percentage of sequence identity: 100
1dky B - percentage of sequence identity: 100
1q5l A - percentage of sequence identity: 97
2bpr - - percentage of sequence identity: 99
7hsc A - percentage of sequence identity: 60