PDB: 1ek0 Compound: gtp-binding protein ypt51 Classification: ENDOCYTOSIS/EXOCYTOSIS Entry date in PDB: 2000-04-17 Resolution [Å]: 1.48 R-Factor: 0.179

CHAIN: A SWISS-PROT/TREMBL: P36017    KEYWORD: 3D-structure    GTP-binding    Lipoprotein    Prenylation    Protein transport    SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Ypt51    Baker's yeast (Saccharomyces cerevisiae) GO:  GTP binding    small GTPase mediated signal transduction

Image Source: PDB

Loops in ArchDB95 clusters

1ek0_A_82 - EH => SUBCLASS : 3.2.1
1ek0_A_6 - EH => SUBCLASS : 6.1.1
1ek0_A_148 - EH => SUBCLASS : 6.5.1
1ek0_A_135 - HE => SUBCLASS : 1.1.1
1ek0_A_135 - HE => SUBCLASS : 1.2.2
1ek0_A_92 - HE => SUBCLASS : 5.1.1
1ek0_A_42 - HA => SUBCLASS : 2.3.5
1ek0_A_42 - HA => SUBCLASS : 2.3.6

Loops not clustered in ArchDB

1ek0_A_54 - AR
1ek0_A_114 - EH
1ek0_A_20 - HE

1n6h A - percentage of sequence identity: 60
1tu3 A - percentage of sequence identity: 60
1tu3 B - percentage of sequence identity: 60
1tu3 C - percentage of sequence identity: 60
1tu3 D - percentage of sequence identity: 60
1tu3 E - percentage of sequence identity: 60
1tu4 A - percentage of sequence identity: 60
1tu4 B - percentage of sequence identity: 60
1tu4 C - percentage of sequence identity: 60
1tu4 D - percentage of sequence identity: 60